| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g09670 | 6:25,880,842-25,883,508 | - | C2H6g03801 | CX6g043434 | LOC_Os06g48980 | Os06g0703000 | - | Detail |
| C1H6g18502 | 6:25,887,723-25,892,407 | - | C2H6g17371 | CX6g045780 | LOC_Os06g49010 | Os06g0703500 | - | Detail |
| C1H6g16279 | 6:25,896,374-25,897,321 | - | - | - | LOC_Os06g49020 | Os06g0703600 | - | Detail |
| C1H6g29648 | 6:25,898,415-25,901,197 | + | C2H6g15424 | CX6g045783 | LOC_Os06g49030 | Os06g0703800 | - | Detail |
| C1H6g07308 | 6:25,910,174-25,919,099 | + | C2H6g26654 | CX6g045465 | LOC_Os06g49040 | Os06g0703900 | - | Detail |
| C1H6g31643 | 6:25,920,872-25,924,324 | + | C2H6g01098 | CX6g043942 | LOC_Os06g49060 | Os06g0704100 | - | Detail |
| C1H6g21776 | 6:25,925,126-25,925,469 | - | C2H6g14094 | CX6g043513 | LOC_Os06g49070 | Os06g0704200 | - | Detail |
| C1H6g04818 | 6:25,926,051-25,929,679 | + | C2H6g09929 | CX6g042446 | LOC_Os06g49080 | Os06g0704300 | C3H46, OsC3H46, LIC, OsLIC | Detail |
| C1H6g07512 | 6:25,931,685-25,936,836 | + | C2H6g08437 | CX6g045885 | LOC_Os06g49090 | Os06g0704400 | - | Detail |
| C1H6g27120 | 6:25,942,129-25,943,754 | + | C2H6g13363 | CX6g044421 | LOC_Os06g49100 | Os06g0704500 | - | Detail |
| C1H6g00037 | 6:25,945,314-25,949,616 | - | C2H6g08289 | CX6g045141 | LOC_Os06g49110 | Os06g0704600 | - | Detail |
| C1H6g20822 | 6:25,950,325-25,954,757 | - | C2H6g04274 | CX6g043594 | LOC_Os06g49120 | Os06g0704700 | - | Detail |
| C1H6g30381 | 6:25,956,036-25,970,978 | - | C2H6g29592 | CX6g043593 | LOC_Os06g49130 | Os06g0704800 | OsHAC704, OsHAC12 | Detail |
| C1H6g14385 | 6:25,971,877-25,974,591 | + | C2H6g27374 | CX6g041788 | LOC_Os06g49140 | Os06g0704900 | - | Detail |
| C1H6g27051 | 6:25,976,378-25,978,262 | + | C2H6g16318 | CX6g041568 | LOC_Os06g49150 | Os06g0705000 | OsGMT1 | Detail |
| C1H6g17550 | 6:25,979,273-25,980,346 | + | C2H6g07212 | CX6g041902 | LOC_Os06g49160 | Os06g0705100 | - | Detail |
| C1H6g05795 | 6:25,981,184-25,984,997 | - | C2H6g22144 | CX6g044278 | LOC_Os06g49170 | Os06g0705200 | - | Detail |
| C1H6g31669 | 6:25,987,417-25,993,127 | - | C2H6g27734 | CX6g041917 | LOC_Os06g49185 | Os06g0705300 | - | Detail |
| C1H6g13928 | 6:25,993,988-25,996,225 | - | C2H6g16745 | CX6g041917 | LOC_Os06g46840 | Os06g0705350 | - | Detail |
| C1H6g11993 | 6:25,997,556-25,997,852 | + | - | CX6g044181 | LOC_Os06g49190 | Os06g0705400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g30063 | 1:7,513,566-7,518,546 | + | C1H1g03276 | CX1g006822 | LOC_Os01g14840 | Os01g0251200 | - | Detail |
| C2H1g01673 | 1:7,523,852-7,524,208 | - | C1H1g02537 | CX1g002550 | LOC_Os01g14850 | - | - | Detail |
| C2H1g16208 | 1:7,549,614-7,553,847 | + | C1H1g04123 | CX1g004567 | LOC_Os01g14860 | Os01g0252100 | - | Detail |
| C2H1g17129 | 1:7,554,303-7,557,965 | + | C1H1g23778 | CX1g005640 | LOC_Os01g14870 | Os01g0252200 | - | Detail |
| C2H1g11713 | 1:7,557,701-7,557,934 | - | - | CX1g003089 | LOC_Os01g14880 | Os01g0252300 | - | Detail |
| C2H1g15296 | 1:7,565,661-7,566,887 | + | C1H1g04861 | CX1g006443 | LOC_Os01g14890 | Os01g0252600 | - | Detail |
| C2H1g06246 | 1:7,568,460-7,571,423 | + | C1H1g08330 | CX1g002972 | LOC_Os01g14900 | Os01g0299300 | - | Detail |
| C2H1g19089 | 1:7,576,345-7,581,647 | - | C1H1g21907 | CX1g005803 | LOC_Os01g14920 | Os01g0252900 | - | Detail |
| C2H1g11294 | 1:7,583,624-7,586,278 | - | C1H1g26486 | CX1g004430 | LOC_Os01g14926 | Os01g0253000 | - | Detail |
| C2H1g11549 | 1:7,586,480-7,594,775 | - | C1H1g29785 | CX1g003654 | LOC_Os01g14932 | Os01g0253100 | - | Detail |
| C2H1g27442 | 1:7,599,610-7,600,143 | + | - | CX1g005913 | LOC_Os01g14940 | Os01g0253200 | OsPMEI2 | Detail |
| C2H1g17851 | 1:7,602,482-7,608,054 | + | C1H1g19789 | CX1g005041 | LOC_Os01g14950 | Os01g0253300 | - | Detail |
| C2H1g21235 | 1:7,608,336-7,609,568 | - | C1H1g10698 | CX1g002635 | LOC_Os01g14960 | Os01g0253400 | - | Detail |
| C2H1g01331 | 1:7,617,012-7,618,010 | + | C1H1g00294 | CX1g001520 | LOC_Os01g14970 | Os01g0253500 | - | Detail |
| C2H1g04240 | 1:7,619,398-7,621,181 | - | C1H1g14416 | CX1g004991 | LOC_Os01g14980 | Os01g0253600 | - | Detail |
| C2H1g05537 | 1:7,626,508-7,626,921 | - | C1H1g19580 | CX1g001442 | LOC_Os01g14990 | Os01g0253800 | - | Detail |
| C2H1g19003 | 1:7,629,946-7,633,459 | + | C1H1g30013 | CX1g005331 | LOC_Os01g15000 | Os01g0253900 | - | Detail |
| C2H1g00284 | 1:7,639,191-7,644,116 | - | C1H1g10036 | CX1g003937 | LOC_Os01g15010 | Os01g0254000 | OsSar1c | Detail |
| C2H1g02784 | 1:7,646,475-7,655,573 | - | C1H1g19940 | CX1g001725 | LOC_Os01g15020 | Os01g0254100 | - | Detail |
| C2H1g13097 | 1:7,670,302-7,670,571 | - | C1H1g26582 | CX1g000900 | LOC_Os01g15029 | Os01g0254200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |