| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g09670 | 6:25,880,842-25,883,508 | - | C2H6g03801 | CX6g043434 | LOC_Os06g48980 | Os06g0703000 | - | Detail |
| C1H6g18502 | 6:25,887,723-25,892,407 | - | C2H6g17371 | CX6g045780 | LOC_Os06g49010 | Os06g0703500 | - | Detail |
| C1H6g16279 | 6:25,896,374-25,897,321 | - | - | - | LOC_Os06g49020 | Os06g0703600 | - | Detail |
| C1H6g29648 | 6:25,898,415-25,901,197 | + | C2H6g15424 | CX6g045783 | LOC_Os06g49030 | Os06g0703800 | - | Detail |
| C1H6g07308 | 6:25,910,174-25,919,099 | + | C2H6g26654 | CX6g045465 | LOC_Os06g49040 | Os06g0703900 | - | Detail |
| C1H6g31643 | 6:25,920,872-25,924,324 | + | C2H6g01098 | CX6g043942 | LOC_Os06g49060 | Os06g0704100 | - | Detail |
| C1H6g21776 | 6:25,925,126-25,925,469 | - | C2H6g14094 | CX6g043513 | LOC_Os06g49070 | Os06g0704200 | - | Detail |
| C1H6g04818 | 6:25,926,051-25,929,679 | + | C2H6g09929 | CX6g042446 | LOC_Os06g49080 | Os06g0704300 | C3H46, OsC3H46, LIC, OsLIC | Detail |
| C1H6g07512 | 6:25,931,685-25,936,836 | + | C2H6g08437 | CX6g045885 | LOC_Os06g49090 | Os06g0704400 | - | Detail |
| C1H6g27120 | 6:25,942,129-25,943,754 | + | C2H6g13363 | CX6g044421 | LOC_Os06g49100 | Os06g0704500 | - | Detail |
| C1H6g00037 | 6:25,945,314-25,949,616 | - | C2H6g08289 | CX6g045141 | LOC_Os06g49110 | Os06g0704600 | - | Detail |
| C1H6g20822 | 6:25,950,325-25,954,757 | - | C2H6g04274 | CX6g043594 | LOC_Os06g49120 | Os06g0704700 | - | Detail |
| C1H6g30381 | 6:25,956,036-25,970,978 | - | C2H6g29592 | CX6g043593 | LOC_Os06g49130 | Os06g0704800 | OsHAC704, OsHAC12 | Detail |
| C1H6g14385 | 6:25,971,877-25,974,591 | + | C2H6g27374 | CX6g041788 | LOC_Os06g49140 | Os06g0704900 | - | Detail |
| C1H6g27051 | 6:25,976,378-25,978,262 | + | C2H6g16318 | CX6g041568 | LOC_Os06g49150 | Os06g0705000 | OsGMT1 | Detail |
| C1H6g17550 | 6:25,979,273-25,980,346 | + | C2H6g07212 | CX6g041902 | LOC_Os06g49160 | Os06g0705100 | - | Detail |
| C1H6g05795 | 6:25,981,184-25,984,997 | - | C2H6g22144 | CX6g044278 | LOC_Os06g49170 | Os06g0705200 | - | Detail |
| C1H6g31669 | 6:25,987,417-25,993,127 | - | C2H6g27734 | CX6g041917 | LOC_Os06g49185 | Os06g0705300 | - | Detail |
| C1H6g13928 | 6:25,993,988-25,996,225 | - | C2H6g16745 | CX6g041917 | LOC_Os06g46840 | Os06g0705350 | - | Detail |
| C1H6g11993 | 6:25,997,556-25,997,852 | + | - | CX6g044181 | LOC_Os06g49190 | Os06g0705400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23199 | 1:7,159,477-7,164,723 | - | C1H1g06150 | CX1g001271 | LOC_Os01g14100 | Os01g0243200 | - | Detail |
| C2H1g12539 | 1:7,167,297-7,168,034 | - | - | CX1g001593 | LOC_Os01g14110 | Os01g0243400 | OsFIF3 | Detail |
| C2H1g18066 | 1:7,189,915-7,190,589 | - | C1H1g06722 | CX1g005084 | LOC_Os01g14130 | Os01g0243600 | - | Detail |
| C2H1g24885 | 1:7,191,240-7,192,513 | - | C1H1g15302 | CX1g006064 | LOC_Os01g14140 | Os01g0243700 | - | Detail |
| C2H1g14058 | 1:7,201,582-7,203,325 | - | C1H1g21204 | CX1g003858 | LOC_Os01g14180 | Os01g0244000 | - | Detail |
| C2H1g00962 | 1:7,214,560-7,215,717 | - | C1H1g22015 | CX1g003858 | LOC_Os01g14310 | Os01g0244150 | - | Detail |
| C2H1g29475 | 1:7,217,596-7,220,013 | - | C1H1g22015 | CX1g003858 | LOC_Os01g14220 | Os01g0244400 | - | Detail |
| C2H1g27156 | 1:7,234,901-7,236,256 | - | C1H1g13639 | CX1g003858 | LOC_Os01g14280 | Os01g0245000 | - | Detail |
| C2H1g23312 | 1:7,256,698-7,257,468 | + | C1H5g13370 | CX12g016277 | - | - | - | Detail |
| C2H1g03985 | 1:7,266,714-7,267,880 | - | C1H1g22015 | CX1g003858 | LOC_Os01g14320 | Os01g0245532 | - | Detail |
| C2H1g14773 | 1:7,270,851-7,271,741 | + | C1H1g25297 | CX1g003769 | LOC_Os01g14330 | Os01g0245600 | - | Detail |
| C2H1g07386 | 1:7,273,091-7,275,772 | - | C1H1g22015 | CX1g003858 | LOC_Os01g14340 | Os01g0245901 | - | Detail |
| C2H1g07730 | 1:7,283,160-7,291,502 | - | C1H1g05448 | CX1g000804 | LOC_Os01g14370 | Os01g0246100 | - | Detail |
| C2H1g18330 | 1:7,295,320-7,296,337 | + | C1H1g20917 | CX1g002763 | LOC_Os01g14410 | Os01g0246400 | - | Detail |
| C2H1g08066 | 1:7,298,095-7,301,697 | - | C1H1g23943 | CX1g002025 | LOC_Os01g14420 | Os01g0246500 | - | Detail |
| C2H1g28653 | 1:7,306,248-7,306,949 | - | C1H1g28712 | CX1g006604 | LOC_Os01g14430 | Os01g0246601 | - | Detail |
| C2H1g25431 | 1:7,319,681-7,322,101 | + | C1H1g11776 | CX1g004214 | LOC_Os01g14440 | Os01g0246700 | - | Detail |
| C2H1g21282 | 1:7,339,311-7,341,321 | - | C1H1g03620 | CX1g004500 | LOC_Os01g14510 | Os01g0247500 | - | Detail |
| C2H1g20244 | 1:7,344,062-7,344,427 | + | - | CX1g007015 | LOC_Os01g14514 | Os01g0247600 | - | Detail |
| C2H1g08952 | 1:7,346,732-7,349,052 | - | C1H1g20261 | CX1g004212 | LOC_Os01g14520 | Os01g0247700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |