| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20698 | 1:26,375,430-26,379,283 | + | C2H1g20058 | CX1g004912 | LOC_Os01g51390 | Os01g0711100 | - | Detail |
| C1H1g14378 | 1:26,382,583-26,384,638 | + | C2H1g29914 | CX1g006000 | LOC_Os01g51400 | Os01g0711200 | - | Detail |
| C1H1g06125 | 1:26,391,194-26,397,667 | + | C2H1g17094 | CX1g004328 | LOC_Os01g51410 | Os01g0711400 | - | Detail |
| C1H1g22520 | 1:26,398,744-26,402,219 | + | C2H1g13046 | CX1g005290 | LOC_Os01g51420 | Os01g0711500 | OsCBL10 | Detail |
| C1H1g02976 | 1:26,402,795-26,405,579 | + | C2H1g24377 | - | - | - | - | Detail |
| C1H1g07891 | 1:26,410,755-26,413,232 | - | C2H1g30017 | CX1g001138 | LOC_Os01g51450 | Os01g0711800 | - | Detail |
| C1H1g26536 | 1:26,416,653-26,418,394 | - | C2H1g29049 | CX1g003877 | LOC_Os01g51470 | Os01g0712500 | - | Detail |
| C1H1g14497 | 1:26,429,530-26,433,561 | - | C2H1g17668 | CX1g005977 | LOC_Os01g51520 | Os01g0712500 | - | Detail |
| C1H1g30738 | 1:26,434,418-26,438,145 | - | C2H1g18972 | - | - | - | - | Detail |
| C1H1g28237 | 1:26,445,898-26,446,545 | - | C2H1g29576 | CX1g003877 | LOC_Os01g51490 | Os01g0711900 | - | Detail |
| C1H1g23448 | 1:26,453,260-26,455,774 | + | C2H1g29576 | CX1g004056 | LOC_Os01g51510 | Os01g0711900 | - | Detail |
| C1H1g09610 | 1:26,462,673-26,465,002 | - | C2H1g21215 | CX1g005977 | LOC_Os01g51530 | Os01g0712600 | - | Detail |
| C1H1g29773 | 1:26,484,284-26,485,560 | + | C2H1g16428 | CX1g004438 | LOC_Os01g51550 | Os01g0712800 | - | Detail |
| C1H1g05015 | 1:26,491,447-26,492,832 | + | C2H1g17193 | CX1g004707 | LOC_Os01g51570 | Os01g0713200 | - | Detail |
| C1H1g16737 | 1:26,495,968-26,500,936 | + | C2H1g10923 | CX1g006175 | LOC_Os01g51610 | Os01g0713600 | OsLFL1 | Detail |
| C1H1g22175 | 1:26,504,171-26,507,341 | + | C2H1g14637 | CX1g006183 | LOC_Os01g51620 | Os01g0713800 | - | Detail |
| C1H1g05405 | 1:26,510,815-26,532,359 | - | C2H1g19385 | CX1g003130 | LOC_Os01g51630 | Os01g0713900 | - | Detail |
| C1H1g08011 | 1:26,536,931-26,541,173 | - | C2H1g30054 | CX1g004684 | LOC_Os01g51640 | Os01g0714100 | - | Detail |
| C1H1g17120 | 1:26,553,664-26,555,085 | - | C2H1g26622 | CX1g003615 | LOC_Os01g51690 | Os01g0714800 | OsWRKY26 | Detail |
| C1H1g10774 | 1:26,563,309-26,566,896 | - | C2H1g20321 | CX1g003805 | LOC_Os01g51700 | Os01g0714900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g12160 | 2:31,977,251-31,978,025 | + | C1H2g03615 | CX2g022485 | LOC_Os02g57350 | Os02g0818900 | - | Detail |
| C2H2g13224 | 2:31,979,150-31,981,186 | + | C1H2g23220 | CX2g022485 | LOC_Os02g57360 | Os02g0819000 | - | Detail |
| C2H2g09349 | 2:32,001,094-32,003,759 | + | C1H2g05057 | CX2g023697 | LOC_Os02g57370 | Os02g0819100 | OsDHHC1 | Detail |
| C2H2g28063 | 2:32,005,507-32,006,402 | + | C1H2g03792 | CX2g018856 | LOC_Os02g53400 | Os02g0819200 | - | Detail |
| C2H2g11888 | 2:32,008,052-32,013,793 | + | C1H2g16081 | CX2g023843 | LOC_Os02g57390 | Os02g0819300 | - | Detail |
| C2H2g23556 | 2:32,014,351-32,019,166 | - | C1H2g29375 | CX2g024818 | LOC_Os02g57400 | Os02g0819400 | LPA1, OsLpa1.3, Oslpa1, Lpa1, OsLpa1 | Detail |
| C2H2g04446 | 2:32,023,238-32,028,227 | - | C1H2g01387 | CX2g019514 | LOC_Os02g57410 | Os02g0819500 | - | Detail |
| C2H2g12705 | 2:32,035,665-32,039,374 | - | C1H2g02066 | CX2g023750 | LOC_Os02g57420 | Os02g0819600 | - | Detail |
| C2H2g21639 | 2:32,044,698-32,045,991 | - | C1H2g26145 | CX2g022484 | LOC_Os02g57430 | Os02g0819700 | - | Detail |
| C2H2g10374 | 2:32,050,031-32,051,323 | + | C1H2g31294 | CX2g022770 | LOC_Os02g57440 | Os02g0819900 | - | Detail |
| C2H2g05211 | 2:32,052,563-32,056,340 | - | C1H2g00613 | CX2g019574 | LOC_Os02g57450 | Os02g0820000 | - | Detail |
| C2H2g09599 | 2:32,059,046-32,062,103 | + | C1H2g21703 | CX2g023170 | LOC_Os02g57460 | Os02g0820200 | - | Detail |
| C2H2g24658 | 2:32,063,046-32,065,515 | - | C1H2g19315 | CX2g020491 | LOC_Os02g57470 | Os02g0820300 | - | Detail |
| C2H2g13909 | 2:32,068,515-32,069,876 | - | C1H2g17511 | CX2g020751 | LOC_Os02g57480 | Os02g0820400 | - | Detail |
| C2H2g13334 | 2:32,073,929-32,074,692 | - | C1H2g27419 | CX2g023897 | LOC_Os02g57490 | Os02g0820500 | DH1, LBD16 | Detail |
| C2H2g23527 | 2:32,076,901-32,079,768 | - | C1H2g06878 | CX2g020258 | LOC_Os02g57500 | Os02g0820600 | - | Detail |
| C2H2g15378 | 2:32,080,502-32,086,118 | + | C1H2g20124 | CX2g019670 | LOC_Os02g57510 | Os02g0820700 | - | Detail |
| C2H2g25697 | 2:32,088,528-32,089,328 | + | C1H2g18462 | CX2g021426 | LOC_Os02g57520 | Os02g0820800 | PTC2 | Detail |
| C2H2g05580 | 2:32,096,925-32,101,365 | + | C1H2g08194 | CX2g022783 | LOC_Os02g57530 | Os02g0820900 | ETR3, ETR3, OsETR3, OS-ETR3, OsETR3a, OsETR3b, OsPK2, PK2, OsERS4 | Detail |
| C2H2g16075 | 2:32,102,265-32,104,185 | - | C1H2g23403 | CX2g023579 | LOC_Os02g57540 | Os02g0821200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |