| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g07621 | 6:25,624,495-25,625,931 | + | C2H6g00488 | CX6g043244 | LOC_Os06g48660 | Os06g0700100 | - | Detail |
| C1H6g24118 | 6:25,629,678-25,630,259 | - | - | CX6g045422 | LOC_Os06g48680 | Os06g0700300 | - | Detail |
| C1H6g06713 | 6:25,648,527-25,651,640 | - | C2H6g20696 | CX6g043150 | LOC_Os06g48700 | Os06g0700500 | - | Detail |
| C1H6g22333 | 6:25,655,404-25,663,268 | - | C2H6g06236 | CX6g042222 | LOC_Os06g48720 | Os06g0700700 | HMA2, OsHMA2, osHMA2 | Detail |
| C1H6g22780 | 6:25,656,163-25,656,759 | + | - | CX6g042407 | - | Os06g0700550 | - | Detail |
| C1H6g21711 | 6:25,696,178-25,699,613 | - | C2H6g28660 | CX6g044182 | LOC_Os06g48750 | Os06g0701100 | - | Detail |
| C1H6g30062 | 6:25,701,519-25,708,262 | - | C2H6g21072 | CX6g042449 | LOC_Os06g48760 | Os06g0701200 | - | Detail |
| C1H6g30249 | 6:25,708,835-25,716,523 | - | C2H6g10219 | CX6g041951 | LOC_Os06g48770 | Os06g0701300 | - | Detail |
| C1H6g22709 | 6:25,722,228-25,723,457 | - | C2H6g25221 | CX6g042380 | LOC_Os06g48780 | Os06g0701400 | - | Detail |
| C1H6g30798 | 6:25,727,529-25,730,246 | + | C2H6g12207 | CX6g042431 | LOC_Os06g48790 | - | - | Detail |
| C1H6g22238 | 6:25,731,730-25,733,451 | - | C2H6g29564 | CX6g044354 | LOC_Os06g48800 | Os06g0701600 | OsHKT2;4, OsHKT9 | Detail |
| C1H6g25250 | 6:25,744,535-25,746,451 | - | C2H6g13374 | CX6g044354 | LOC_Os06g48810 | Os06g0701700 | - | Detail |
| C1H6g03679 | 6:25,798,323-25,798,721 | + | C2H6g10307 | CX6g045889 | LOC_Os06g48850 | Os06g0701900 | OsSAUR27 | Detail |
| C1H6g20549 | 6:25,800,838-25,801,272 | - | C2H6g07274 | CX6g041384 | LOC_Os06g48860 | Os06g0702000 | - | Detail |
| C1H6g03943 | 6:25,812,462-25,815,888 | + | C2H6g14535 | CX6g045144 | LOC_Os06g48870 | Os06g0702100 | - | Detail |
| C1H6g29012 | 6:25,822,808-25,824,711 | - | - | CX6g043002 | LOC_Os06g48880 | Os06g0702200 | - | Detail |
| C1H6g13761 | 6:25,831,450-25,839,557 | + | C2H6g11925 | CX6g043833 | LOC_Os06g48940 | Os06g0702500 | - | Detail |
| C1H6g08040 | 6:25,862,052-25,870,217 | + | C2H6g09619 | CX6g042776 | LOC_Os06g48950 | Os06g0702600 | ARF7A, OsARF7a, OsARF19 | Detail |
| C1H6g18606 | 6:25,870,627-25,872,385 | - | C2H6g06313 | CX6g044368 | LOC_Os06g48960 | Os06g0702700 | - | Detail |
| C1H6g07052 | 6:25,874,807-25,877,957 | + | C2H6g28533 | CX6g045073 | LOC_Os06g48970 | Os06g0702800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g15898 | 10:653,087-656,979 | - | C1H10g09309 | CX10g009683 | LOC_Os10g02080 | Os10g0111300 | - | Detail |
| C2H10g23212 | 10:657,532-661,410 | - | C1H10g06833 | CX10g008349 | LOC_Os10g02100 | Os10g0109900 | - | Detail |
| C2H10g20726 | 10:664,426-664,989 | - | C1H10g04337 | - | LOC_Os10g02100 | - | - | Detail |
| C2H10g14574 | 10:735,562-736,362 | - | C1H10g10065 | CX10g009624 | LOC_Os10g02210 | Os10g0370700 | - | Detail |
| C2H10g19946 | 10:736,515-738,818 | - | C1H10g10065 | CX10g007603 | LOC_Os10g02210 | Os10g0110600 | - | Detail |
| C2H10g28523 | 10:742,547-747,251 | - | C1H10g01428 | CX10g009624 | LOC_Os10g02220 | Os10g0110800 | - | Detail |
| C2H10g02979 | 10:757,525-760,930 | - | C1H10g14151 | CX10g007698 | LOC_Os10g02240 | Os10g0111300 | - | Detail |
| C2H10g25239 | 10:767,826-771,921 | + | C1H10g13142 | CX10g008040 | LOC_Os10g02250 | Os10g0111400 | - | Detail |
| C2H10g15357 | 10:783,788-787,000 | - | C1H10g23159 | CX10g010727 | LOC_Os10g02260 | Os10g0111700 | - | Detail |
| C2H10g12231 | 10:958,378-958,936 | - | C1H10g15602 | - | - | - | - | Detail |
| C2H10g05598 | 10:976,716-977,553 | - | C1H10g16062 | CX10g008718 | LOC_Os10g02300 | Os10g0112100 | OsFWL5, OsPcr1, PCR1, OsPCR1 | Detail |
| C2H10g02907 | 10:984,679-986,712 | + | C1H10g00479 | CX10g007687 | LOC_Os10g02340 | Os10g0112500 | - | Detail |
| C2H10g10895 | 10:987,094-991,377 | - | C1H10g31497 | CX10g008471 | LOC_Os10g02350 | Os10g0112600 | - | Detail |
| C2H10g26960 | 10:997,884-1,001,383 | - | C1H10g27089 | CX10g008321 | LOC_Os10g02360 | Os10g0112700 | - | Detail |
| C2H10g01140 | 10:1,013,382-1,015,128 | + | C1H10g02188 | CX10g010189 | LOC_Os10g02380 | Os10g0113000 | - | Detail |
| C2H10g00834 | 10:1,022,317-1,024,491 | + | C1H10g08832 | CX10g009865 | LOC_Os10g02380 | Os10g0113100 | - | Detail |
| C2H10g05382 | 10:1,026,310-1,026,816 | + | - | - | - | - | - | Detail |
| C2H10g06909 | 10:1,031,408-1,031,719 | + | C1H10g00488 | CX10g009124 | LOC_Os10g02480 | Os10g0113900 | - | Detail |
| C2H10g02551 | 10:1,033,020-1,036,318 | + | C1H10g26444 | CX10g009124 | LOC_Os10g02490 | Os10g0114300 | - | Detail |
| C2H10g21167 | 10:1,042,013-1,045,654 | + | C1H10g18697 | CX10g007974 | LOC_Os10g02490 | Os10g0114300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |