| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g12139 | 6:25,502,371-25,504,489 | - | C2H6g22057 | CX6g043495 | LOC_Os06g48300 | Os06g0698300 | - | Detail |
| C1H6g02243 | 6:25,511,473-25,512,549 | - | C2H6g08508 | CX6g044756 | LOC_Os06g48320 | Os06g0698500 | - | Detail |
| C1H6g28256 | 6:25,525,218-25,527,239 | + | - | CX6g044097 | LOC_Os06g48330 | Os06g0698600 | - | Detail |
| C1H6g09472 | 6:25,529,186-25,530,538 | - | C2H9g24688 | CX6g043633 | LOC_Os06g48350 | Os06g0698674 | - | Detail |
| C1H6g29169 | 6:25,536,064-25,537,684 | - | - | CX6g041663 | - | Os06g0698711 | - | Detail |
| C1H6g29243 | 6:25,537,718-25,538,477 | + | C2H6g28438 | CX6g045199 | - | - | - | Detail |
| C1H6g28600 | 6:25,544,205-25,548,250 | + | C2H6g07791 | CX6g043111 | LOC_Os06g48510 | Os06g0698785 | OsCMO | Detail |
| C1H6g16400 | 6:25,549,085-25,552,414 | - | C2H6g00629 | CX6g041163 | LOC_Os06g48520 | Os06g0698812 | - | Detail |
| C1H6g29320 | 6:25,554,140-25,560,858 | - | C2H6g05312 | CX6g042411 | LOC_Os06g48530 | Os06g0698859 | Du13 | Detail |
| C1H6g30614 | 6:25,562,736-25,567,234 | - | C2H6g07714 | CX6g041225 | LOC_Os06g48534 | Os06g0698900 | - | Detail |
| C1H6g12443 | 6:25,573,944-25,575,511 | + | C2H6g12400 | CX6g042241 | LOC_Os06g48560 | Os06g0699100 | - | Detail |
| C1H6g20110 | 6:25,576,195-25,578,676 | - | C2H6g18550 | CX6g041318 | LOC_Os06g48570 | Os06g0699200 | - | Detail |
| C1H6g14817 | 6:25,582,788-25,586,757 | + | C2H6g03180 | CX6g041777 | LOC_Os06g48590 | Os06g0699400 | MAPK7, OsMAPK7, OsMPK7 | Detail |
| C1H6g09808 | 6:25,587,241-25,587,920 | - | C2H6g13781 | CX6g045113 | LOC_Os06g48600 | Os06g0699500 | - | Detail |
| C1H6g13916 | 6:25,592,689-25,595,060 | + | C2H6g27456 | CX6g043081 | LOC_Os06g48610 | Os06g0699600 | - | Detail |
| C1H6g15904 | 6:25,597,156-25,602,814 | + | C2H6g22423 | CX6g042973 | LOC_Os06g48620 | Os06g0699700 | - | Detail |
| C1H6g08270 | 6:25,603,764-25,605,768 | + | C2H6g14299 | CX6g043568 | LOC_Os06g48630 | Os06g0699800 | - | Detail |
| C1H6g21659 | 6:25,606,288-25,606,798 | + | C2H6g22199 | CX6g043568 | LOC_Os06g48630 | - | - | Detail |
| C1H6g23286 | 6:25,607,106-25,615,310 | - | C2H6g17206 | CX6g041853 | LOC_Os06g48640 | Os06g0699900 | OsRpn1b | Detail |
| C1H6g21902 | 6:25,617,438-25,623,924 | + | C2H6g19335 | CX6g042738 | LOC_Os06g48650 | Os06g0700000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g02659 | 2:21,650,013-21,652,314 | + | C1H2g31252 | CX2g021015 | LOC_Os02g38040 | Os02g0593600 | OsIRL2 | Detail |
| C2H2g02107 | 2:21,652,904-21,658,629 | - | C1H2g28738 | CX2g022113 | LOC_Os02g38050 | Os02g0593700 | - | Detail |
| C2H2g27414 | 2:21,662,462-21,666,899 | + | C1H2g05228 | CX2g022962 | LOC_Os02g38060 | Os02g0593900 | - | Detail |
| C2H2g28617 | 2:21,671,276-21,676,533 | + | C1H2g19613 | CX2g020918 | LOC_Os02g38080 | Os02g0594100 | - | Detail |
| C2H2g22920 | 2:21,706,647-21,709,519 | + | C1H2g26025 | CX2g022653 | LOC_Os02g38120 | Os02g0594700 | OsBTBN3 | Detail |
| C2H2g27568 | 2:21,725,819-21,728,861 | - | C1H2g03331 | CX2g023488 | LOC_Os02g38130 | Os02g0594800 | An-4, OsSGL | Detail |
| C2H2g08333 | 2:21,734,849-21,737,047 | - | C1H2g12247 | CX2g020733 | LOC_Os02g38160 | Os02g0594900 | - | Detail |
| C2H2g24282 | 2:21,748,043-21,751,282 | - | C1H2g09203 | CX2g024257 | LOC_Os02g38160 | Os02g0595100 | - | Detail |
| C2H2g12684 | 2:21,768,658-21,769,571 | - | C1H2g18043 | CX2g021227 | LOC_Os02g38180 | Os02g0595300 | - | Detail |
| C2H2g27779 | 2:21,773,593-21,777,440 | - | C1H2g28766 | CX2g023998 | LOC_Os02g38200 | Os02g0595500 | - | Detail |
| C2H2g13918 | 2:21,783,398-21,787,026 | + | C1H2g15529 | CX2g023123 | LOC_Os02g38220 | Os02g0595800 | - | Detail |
| C2H2g12990 | 2:21,788,231-21,789,893 | - | C1H2g13753 | CX2g024625 | LOC_Os02g38230 | Os02g0595900 | NAR2.1, OsNAR2.1, OsNRT3.1A | Detail |
| C2H2g05640 | 2:21,794,766-21,797,513 | - | C1H2g12816 | CX2g021096 | LOC_Os02g38240 | Os02g0596000 | - | Detail |
| C2H2g05424 | 2:21,799,545-21,808,652 | - | C1H2g21293 | CX2g020732 | LOC_Os02g38250 | Os02g0596100 | - | Detail |
| C2H2g17152 | 2:21,810,292-21,812,161 | + | C1H2g16769 | CX2g020902 | LOC_Os02g38260 | Os02g0596200 | LSSR1 | Detail |
| C2H2g16801 | 2:21,813,661-21,815,350 | - | C1H2g16904 | - | - | - | - | Detail |
| C2H2g06504 | 2:21,815,761-21,817,377 | - | C1H2g00956 | CX2g024363 | LOC_Os02g38290 | Os02g0596300 | CYP94E1, OsCYP94E1 | Detail |
| C2H2g01473 | 2:21,820,091-21,820,710 | - | - | - | - | - | - | Detail |
| C2H2g22627 | 2:21,823,310-21,826,480 | - | C1H2g15841 | CX2g024642 | LOC_Os02g38300 | Os02g0596500 | - | Detail |
| C2H2g25090 | 2:21,827,821-21,828,330 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |