| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g04946 | 6:25,345,788-25,347,138 | + | C2H6g15314 | CX6g043040 | LOC_Os06g41910 | Os06g0624700 | - | Detail |
| C1H6g27295 | 6:25,348,401-25,349,895 | - | C2H6g23077 | CX6g045449 | LOC_Os06g48010 | Os06g0695300 | - | Detail |
| C1H6g22856 | 6:25,357,463-25,359,875 | + | C2H6g04958 | CX6g045003 | LOC_Os06g48020 | Os06g0695400 | - | Detail |
| C1H6g06805 | 6:25,369,300-25,369,587 | - | C2H9g19556 | CX6g043360 | LOC_Os06g41680 | - | - | Detail |
| C1H6g23349 | 6:25,370,141-25,370,889 | - | - | - | - | - | - | Detail |
| C1H6g17302 | 6:25,377,390-25,380,688 | + | C2H6g12694 | CX6g043601 | LOC_Os06g48030 | Os06g0695500 | - | Detail |
| C1H6g13893 | 6:25,385,547-25,389,649 | - | C2H6g26512 | CX6g045698 | LOC_Os06g48040 | Os06g0695600 | OsMAR1 | Detail |
| C1H6g14725 | 6:25,398,510-25,400,351 | + | - | CX6g041666 | LOC_Os06g48050 | Os06g0695700 | - | Detail |
| C1H6g20833 | 6:25,401,355-25,401,627 | - | C2H6g26361 | CX6g043064 | LOC_Os06g48060 | Os06g0695800 | STAR1, OsENA2, OsABCI12 | Detail |
| C1H6g01525 | 6:25,404,092-25,404,866 | - | C2H6g12199 | CX6g043064 | LOC_Os06g48060 | Os06g0695800 | STAR1, OsENA2, OsABCI12 | Detail |
| C1H6g23654 | 6:25,408,267-25,409,451 | - | C2H6g02871 | CX6g041940 | LOC_Os06g48065 | Os06g0695900 | RAE3, OsRAE3 | Detail |
| C1H6g11584 | 6:25,417,433-25,419,012 | + | C2H6g13578 | CX6g042730 | LOC_Os06g48160 | Os06g0696400 | - | Detail |
| C1H6g12447 | 6:25,426,176-25,428,196 | + | C2H6g05532 | CX6g042120 | LOC_Os06g48170 | Os06g0696566 | - | Detail |
| C1H6g10337 | 6:25,433,564-25,435,205 | + | C2H6g10857 | CX6g041933 | LOC_Os06g48200 | Os06g0696600 | - | Detail |
| C1H6g16540 | 6:25,445,703-25,447,283 | - | C2H6g22123 | CX6g043275 | LOC_Os06g48200 | Os06g0697000 | - | Detail |
| C1H6g01111 | 6:25,460,593-25,463,307 | + | C2H6g13910 | CX6g043639 | LOC_Os06g48210 | Os06g0697200 | - | Detail |
| C1H6g08925 | 6:25,470,221-25,472,538 | - | C2H6g09402 | CX6g044343 | LOC_Os06g48230 | Os06g0697400 | - | Detail |
| C1H6g16040 | 6:25,477,298-25,478,812 | + | C2H6g27907 | CX6g042686 | LOC_Os06g48240 | Os06g0697500 | - | Detail |
| C1H6g05037 | 6:25,483,191-25,484,708 | - | C2H6g27095 | CX6g042686 | LOC_Os06g48250 | Os06g0697600 | OsAAA-ATPase3 | Detail |
| C1H6g22098 | 6:25,492,792-25,493,886 | - | C2H6g16662 | CX6g041589 | LOC_Os06g48290 | Os06g0698200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g16658 | 5:17,482,932-17,485,177 | + | C1H5g25030 | CX5g039497 | LOC_Os05g34920 | Os05g0423200 | - | Detail |
| C2H5g05490 | 5:17,488,549-17,490,505 | + | C1H5g31746 | CX5g037692 | LOC_Os05g34940 | Os05g0423400 | OsMADS4 | Detail |
| C2H5g13079 | 5:17,491,081-17,492,994 | - | C1H5g25033 | CX5g038348 | LOC_Os05g34950 | Os05g0423500 | - | Detail |
| C2H5g08477 | 5:17,507,460-17,511,208 | + | C1H5g20302 | CX5g036706 | LOC_Os05g34980 | Os05g0424000 | OsAAP11F, AAP11F, OsAAP7, AAP7 | Detail |
| C2H5g17702 | 5:17,518,338-17,519,933 | - | C1H5g19880 | CX5g039198 | LOC_Os05g35010 | Os05g0424300 | - | Detail |
| C2H5g01235 | 5:17,530,228-17,530,689 | + | C1H5g26014 | CX5g038130 | LOC_Os05g35050 | Os05g0424700 | COPT5 | Detail |
| C2H5g19210 | 5:17,533,657-17,536,871 | - | C1H5g09390 | CX5g039042 | LOC_Os05g35060 | Os05g0424800 | - | Detail |
| C2H5g11670 | 5:17,540,323-17,546,056 | - | C1H5g14947 | CX5g037394 | LOC_Os05g35070 | Os05g0425000 | - | Detail |
| C2H5g20022 | 5:17,560,587-17,564,446 | + | C1H5g09442 | CX5g040956 | LOC_Os05g35110 | Os05g0425700 | - | Detail |
| C2H5g25486 | 5:17,574,439-17,575,293 | + | C1H5g28152 | CX5g038358 | LOC_Os05g35140 | Os05g0426000 | OsSWEET1b | Detail |
| C2H5g16085 | 5:17,575,645-17,577,549 | + | C1H5g25816 | CX5g040098 | LOC_Os05g35160 | Os05g0426100 | - | Detail |
| C2H5g06015 | 5:17,578,020-17,582,180 | - | C1H5g10910 | CX5g039886 | LOC_Os05g35170 | Os05g0426200 | IDEF2 | Detail |
| C2H5g25451 | 5:17,584,620-17,588,248 | + | C1H5g26456 | CX5g040670 | LOC_Os05g35190 | Os05g0426300 | - | Detail |
| C2H5g25115 | 5:17,588,374-17,593,833 | - | C1H5g31800 | CX5g040243 | LOC_Os05g35200 | Os05g0426400 | - | Detail |
| C2H5g27233 | 5:17,622,230-17,624,007 | + | C1H5g30451 | CX5g037277 | LOC_Os05g35230 | Os05g0426800 | - | Detail |
| C2H5g06354 | 5:17,626,370-17,626,975 | + | C1H5g08438 | CX5g037288 | LOC_Os05g35240 | Os05g0426900 | - | Detail |
| C2H5g02568 | 5:17,637,994-17,640,623 | + | C1H5g22553 | CX5g040123 | LOC_Os05g35260 | Os05g0427100 | - | Detail |
| C2H5g20250 | 5:17,644,057-17,650,581 | - | C1H5g07626 | CX5g037167 | LOC_Os05g35266 | Os05g0427200 | - | Detail |
| C2H5g08943 | 5:17,652,618-17,654,768 | - | C1H5g08356 | CX5g036951 | LOC_Os05g35290 | Os05g0427400 | - | Detail |
| C2H5g12313 | 5:17,662,829-17,666,025 | - | C1H5g09774 | CX5g040179 | LOC_Os05g26902 | Os05g0427900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |