| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g04946 | 6:25,345,788-25,347,138 | + | C2H6g15314 | CX6g043040 | LOC_Os06g41910 | Os06g0624700 | - | Detail |
| C1H6g27295 | 6:25,348,401-25,349,895 | - | C2H6g23077 | CX6g045449 | LOC_Os06g48010 | Os06g0695300 | - | Detail |
| C1H6g22856 | 6:25,357,463-25,359,875 | + | C2H6g04958 | CX6g045003 | LOC_Os06g48020 | Os06g0695400 | - | Detail |
| C1H6g06805 | 6:25,369,300-25,369,587 | - | C2H9g19556 | CX6g043360 | LOC_Os06g41680 | - | - | Detail |
| C1H6g23349 | 6:25,370,141-25,370,889 | - | - | - | - | - | - | Detail |
| C1H6g17302 | 6:25,377,390-25,380,688 | + | C2H6g12694 | CX6g043601 | LOC_Os06g48030 | Os06g0695500 | - | Detail |
| C1H6g13893 | 6:25,385,547-25,389,649 | - | C2H6g26512 | CX6g045698 | LOC_Os06g48040 | Os06g0695600 | OsMAR1 | Detail |
| C1H6g14725 | 6:25,398,510-25,400,351 | + | - | CX6g041666 | LOC_Os06g48050 | Os06g0695700 | - | Detail |
| C1H6g20833 | 6:25,401,355-25,401,627 | - | C2H6g26361 | CX6g043064 | LOC_Os06g48060 | Os06g0695800 | STAR1, OsENA2, OsABCI12 | Detail |
| C1H6g01525 | 6:25,404,092-25,404,866 | - | C2H6g12199 | CX6g043064 | LOC_Os06g48060 | Os06g0695800 | STAR1, OsENA2, OsABCI12 | Detail |
| C1H6g23654 | 6:25,408,267-25,409,451 | - | C2H6g02871 | CX6g041940 | LOC_Os06g48065 | Os06g0695900 | RAE3, OsRAE3 | Detail |
| C1H6g11584 | 6:25,417,433-25,419,012 | + | C2H6g13578 | CX6g042730 | LOC_Os06g48160 | Os06g0696400 | - | Detail |
| C1H6g12447 | 6:25,426,176-25,428,196 | + | C2H6g05532 | CX6g042120 | LOC_Os06g48170 | Os06g0696566 | - | Detail |
| C1H6g10337 | 6:25,433,564-25,435,205 | + | C2H6g10857 | CX6g041933 | LOC_Os06g48200 | Os06g0696600 | - | Detail |
| C1H6g16540 | 6:25,445,703-25,447,283 | - | C2H6g22123 | CX6g043275 | LOC_Os06g48200 | Os06g0697000 | - | Detail |
| C1H6g01111 | 6:25,460,593-25,463,307 | + | C2H6g13910 | CX6g043639 | LOC_Os06g48210 | Os06g0697200 | - | Detail |
| C1H6g08925 | 6:25,470,221-25,472,538 | - | C2H6g09402 | CX6g044343 | LOC_Os06g48230 | Os06g0697400 | - | Detail |
| C1H6g16040 | 6:25,477,298-25,478,812 | + | C2H6g27907 | CX6g042686 | LOC_Os06g48240 | Os06g0697500 | - | Detail |
| C1H6g05037 | 6:25,483,191-25,484,708 | - | C2H6g27095 | CX6g042686 | LOC_Os06g48250 | Os06g0697600 | OsAAA-ATPase3 | Detail |
| C1H6g22098 | 6:25,492,792-25,493,886 | - | C2H6g16662 | CX6g041589 | LOC_Os06g48290 | Os06g0698200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09624 | 1:30,787,077-30,788,245 | - | C1H1g00772 | CX1g005248 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| C2H1g09286 | 1:30,799,473-30,816,246 | - | C1H1g15712 | CX1g002744 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| C2H1g26961 | 1:30,828,310-30,834,847 | - | C1H1g15897 | CX1g002744 | LOC_Os01g60050 | Os01g0816500 | - | Detail |
| C2H1g04146 | 1:30,837,506-30,842,632 | + | C1H1g04794 | CX1g001742 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| C2H1g13967 | 1:30,844,373-30,844,582 | + | C1H1g04794 | CX1g001742 | LOC_Os01g60070 | Os01g0816600 | - | Detail |
| C2H1g24791 | 1:30,845,806-30,847,272 | + | C1H1g24642 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C2H1g25178 | 1:30,847,362-30,847,664 | + | C1H1g24879 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C2H1g12383 | 1:30,852,593-30,855,794 | - | C1H1g23182 | CX1g001408 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| C2H1g27536 | 1:30,858,990-30,862,426 | - | C1H1g20937 | CX1g001908 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| C2H1g05301 | 1:30,867,420-30,870,525 | + | C1H1g16273 | CX1g005873 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| C2H1g04044 | 1:30,871,690-30,872,622 | - | C1H1g15906 | CX1g004355 | - | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C2H1g17170 | 1:30,884,562-30,888,327 | + | C1H1g14583 | CX1g000357 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| C2H1g22450 | 1:30,888,779-30,892,097 | - | C1H1g28961 | CX1g003723 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| C2H1g03576 | 1:30,903,588-30,907,758 | + | C1H1g28985 | CX1g005948 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| C2H1g16399 | 1:30,911,405-30,912,871 | + | C1H1g10378 | CX1g005236 | - | Os01g0818100 | - | Detail |
| C2H1g17192 | 1:30,922,297-30,925,172 | + | C1H1g09654 | CX1g002636 | LOC_Os01g60260 | Os01g0818300 | - | Detail |
| C2H1g08644 | 1:30,931,215-30,934,712 | + | C1H1g30151 | CX1g003042 | LOC_Os01g60270 | Os01g0818400 | - | Detail |
| C2H1g07956 | 1:30,936,955-30,947,811 | - | C1H1g03453 | CX1g000179 | LOC_Os01g60280 | Os01g0818700 | - | Detail |
| C2H1g13182 | 1:30,953,125-30,956,828 | - | - | - | LOC_Os01g60290 | Os01g0818900 | - | Detail |
| C2H1g24195 | 1:30,956,541-30,960,942 | + | C1H1g23393 | CX1g001508 | LOC_Os01g60309 | Os01g0819000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |