| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g16787 | 6:24,971,679-24,971,957 | - | - | CX6g043880 | LOC_Os06g47220 | Os06g0686600 | - | Detail |
| C1H6g30487 | 6:24,978,159-24,980,130 | - | C2H6g26495 | CX6g042996 | - | - | - | Detail |
| C1H6g23705 | 6:24,981,271-24,981,489 | + | - | CX6g045608 | - | Os06g0686900 | - | Detail |
| C1H6g23095 | 6:24,982,444-24,985,740 | - | C2H6g22763 | CX6g043952 | LOC_Os06g47250 | Os06g0687000 | - | Detail |
| C1H6g08187 | 6:24,991,811-24,993,065 | + | C2H6g29052 | CX6g041420 | LOC_Os06g47260 | Os06g0687100 | - | Detail |
| C1H6g07946 | 6:24,993,465-24,994,589 | + | C2H6g16561 | CX6g043467 | LOC_Os06g47270 | Os06g0687200 | OsDIRP1 | Detail |
| C1H6g16897 | 6:24,998,457-25,002,791 | - | C2H6g00336 | CX6g044027 | LOC_Os06g47290 | Os06g0687400 | - | Detail |
| C1H6g27517 | 6:25,003,713-25,007,931 | - | C2H6g20702 | CX6g045285 | LOC_Os06g47294 | Os06g0687450 | - | Detail |
| C1H6g00586 | 6:25,009,673-25,014,428 | + | C2H6g29325 | CX6g041285 | LOC_Os06g47300 | Os06g0687500 | - | Detail |
| C1H6g22446 | 6:25,018,855-25,019,872 | + | C2H6g12967 | CX6g042264 | LOC_Os06g47310 | Os06g0687600 | - | Detail |
| C1H6g04180 | 6:25,021,310-25,026,238 | - | C2H6g20319 | CX6g044832 | LOC_Os06g47320 | Os06g0687700 | - | Detail |
| C1H6g10591 | 6:25,028,057-25,033,135 | + | C2H6g13915 | CX6g045256 | LOC_Os06g47330 | Os06g0687800 | - | Detail |
| C1H6g18505 | 6:25,034,159-25,037,448 | + | C2H6g24879 | CX6g045563 | LOC_Os06g47340 | Os06g0687900 | OsIRX14, OsGT43J, OsGT43J/OsIRX14 | Detail |
| C1H6g04786 | 6:25,038,615-25,045,394 | + | C2H6g23849 | CX6g044139 | LOC_Os06g47350 | Os06g0688100 | - | Detail |
| C1H6g31053 | 6:25,046,238-25,047,477 | - | C2H6g01192 | CX6g042228 | LOC_Os06g47360 | Os06g0688200 | - | Detail |
| C1H6g01110 | 6:25,048,799-25,049,499 | - | - | - | - | - | - | Detail |
| C1H6g29639 | 6:25,050,537-25,051,496 | - | - | CX6g044230 | LOC_Os06g43740 | Os06g0645100 | - | Detail |
| C1H6g06587 | 6:25,060,919-25,065,590 | - | C2H6g10086 | CX6g042739 | LOC_Os06g47470 | Os06g0689600 | OsRLCK214 | Detail |
| C1H6g03265 | 6:25,067,492-25,067,968 | + | - | CX6g045171 | LOC_Os06g47480 | Os06g0689700 | - | Detail |
| C1H6g27899 | 6:25,074,274-25,083,204 | - | C2H6g09447 | CX6g043799 | LOC_Os06g47550 | Os06g0690700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g12320 | 4:28,160,357-28,164,064 | - | C1H4g08062 | CX4g034636 | LOC_Os04g54870 | Os04g0641400 | - | Detail |
| C2H4g02939 | 4:28,171,262-28,171,681 | - | C1H4g25048 | - | LOC_Os04g54900 | Os04g0641700 | OsILI1 | Detail |
| C2H4g16501 | 4:28,188,581-28,195,094 | - | C1H4g05112 | CX4g035146 | LOC_Os04g54930 | Os04g0642000 | - | Detail |
| C2H4g20907 | 4:28,200,890-28,203,882 | + | C1H4g03037 | CX4g034568 | LOC_Os04g54940 | Os04g0642100 | - | Detail |
| C2H4g19294 | 4:28,207,440-28,209,816 | - | C1H4g13287 | CX4g034114 | LOC_Os04g54960 | Os04g0642300 | - | Detail |
| C2H4g04804 | 4:28,210,985-28,211,607 | - | C1H7g08411 | CX4g033158 | - | - | - | Detail |
| C2H4g06799 | 4:28,217,701-28,218,450 | + | C1H4g31812 | CX4g036426 | LOC_Os04g55000 | Os04g0643000 | - | Detail |
| C2H4g14202 | 4:28,225,668-28,230,501 | + | C1H4g05482 | CX4g036426 | LOC_Os04g55030 | Os04g0643000 | - | Detail |
| C2H4g12695 | 4:28,232,729-28,235,390 | + | C1H4g16082 | CX4g032227 | LOC_Os04g55040 | Os04g0643100 | - | Detail |
| C2H4g28284 | 4:28,236,387-28,240,181 | - | C1H4g07679 | CX4g032328 | LOC_Os04g55050 | Os04g0643200 | - | Detail |
| C2H4g13893 | 4:28,242,345-28,247,705 | + | C1H4g26887 | CX4g032467 | LOC_Os04g55060 | Os04g0643300 | - | Detail |
| C2H4g14055 | 4:28,248,699-28,250,908 | - | C1H4g14904 | CX4g034614 | LOC_Os04g55070 | Os04g0643500 | - | Detail |
| C2H4g07680 | 4:28,252,071-28,259,557 | + | C1H4g04970 | CX4g031952 | LOC_Os04g55080 | Os04g0643600 | OsCNGC6 | Detail |
| C2H4g17557 | 4:28,259,781-28,261,121 | + | C1H4g25880 | CX4g032969 | LOC_Os04g55090 | Os04g0643700 | - | Detail |
| C2H4g05237 | 4:28,266,472-28,268,829 | + | C1H4g19289 | CX4g036082 | LOC_Os04g55100 | Os04g0643800 | - | Detail |
| C2H4g28955 | 4:28,272,198-28,274,538 | + | C1H4g06814 | CX4g032719 | LOC_Os04g55110 | Os04g0644000 | - | Detail |
| C2H4g21587 | 4:28,275,619-28,276,185 | + | - | CX4g035512 | LOC_Os04g55120 | Os04g0644100 | - | Detail |
| C2H4g25807 | 4:28,278,621-28,281,260 | - | - | CX4g036399 | LOC_Os04g55130 | Os04g0644200 | - | Detail |
| C2H4g15496 | 4:28,286,109-28,290,179 | + | C1H4g18784 | CX4g035567 | LOC_Os04g55150 | Os04g0644300 | - | Detail |
| C2H4g07022 | 4:28,290,599-28,291,489 | - | C1H4g27799 | CX4g033466 | LOC_Os04g55159 | Os04g0644400 | OsAAI1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |