| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g16787 | 6:24,971,679-24,971,957 | - | - | CX6g043880 | LOC_Os06g47220 | Os06g0686600 | - | Detail |
| C1H6g30487 | 6:24,978,159-24,980,130 | - | C2H6g26495 | CX6g042996 | - | - | - | Detail |
| C1H6g23705 | 6:24,981,271-24,981,489 | + | - | CX6g045608 | - | Os06g0686900 | - | Detail |
| C1H6g23095 | 6:24,982,444-24,985,740 | - | C2H6g22763 | CX6g043952 | LOC_Os06g47250 | Os06g0687000 | - | Detail |
| C1H6g08187 | 6:24,991,811-24,993,065 | + | C2H6g29052 | CX6g041420 | LOC_Os06g47260 | Os06g0687100 | - | Detail |
| C1H6g07946 | 6:24,993,465-24,994,589 | + | C2H6g16561 | CX6g043467 | LOC_Os06g47270 | Os06g0687200 | OsDIRP1 | Detail |
| C1H6g16897 | 6:24,998,457-25,002,791 | - | C2H6g00336 | CX6g044027 | LOC_Os06g47290 | Os06g0687400 | - | Detail |
| C1H6g27517 | 6:25,003,713-25,007,931 | - | C2H6g20702 | CX6g045285 | LOC_Os06g47294 | Os06g0687450 | - | Detail |
| C1H6g00586 | 6:25,009,673-25,014,428 | + | C2H6g29325 | CX6g041285 | LOC_Os06g47300 | Os06g0687500 | - | Detail |
| C1H6g22446 | 6:25,018,855-25,019,872 | + | C2H6g12967 | CX6g042264 | LOC_Os06g47310 | Os06g0687600 | - | Detail |
| C1H6g04180 | 6:25,021,310-25,026,238 | - | C2H6g20319 | CX6g044832 | LOC_Os06g47320 | Os06g0687700 | - | Detail |
| C1H6g10591 | 6:25,028,057-25,033,135 | + | C2H6g13915 | CX6g045256 | LOC_Os06g47330 | Os06g0687800 | - | Detail |
| C1H6g18505 | 6:25,034,159-25,037,448 | + | C2H6g24879 | CX6g045563 | LOC_Os06g47340 | Os06g0687900 | OsIRX14, OsGT43J, OsGT43J/OsIRX14 | Detail |
| C1H6g04786 | 6:25,038,615-25,045,394 | + | C2H6g23849 | CX6g044139 | LOC_Os06g47350 | Os06g0688100 | - | Detail |
| C1H6g31053 | 6:25,046,238-25,047,477 | - | C2H6g01192 | CX6g042228 | LOC_Os06g47360 | Os06g0688200 | - | Detail |
| C1H6g01110 | 6:25,048,799-25,049,499 | - | - | - | - | - | - | Detail |
| C1H6g29639 | 6:25,050,537-25,051,496 | - | - | CX6g044230 | LOC_Os06g43740 | Os06g0645100 | - | Detail |
| C1H6g06587 | 6:25,060,919-25,065,590 | - | C2H6g10086 | CX6g042739 | LOC_Os06g47470 | Os06g0689600 | OsRLCK214 | Detail |
| C1H6g03265 | 6:25,067,492-25,067,968 | + | - | CX6g045171 | LOC_Os06g47480 | Os06g0689700 | - | Detail |
| C1H6g27899 | 6:25,074,274-25,083,204 | - | C2H6g09447 | CX6g043799 | LOC_Os06g47550 | Os06g0690700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g20974 | 3:11,018,085-11,024,624 | + | C1H3g19042 | CX3g026559 | LOC_Os03g21720 | Os03g0335300 | - | Detail |
| C2H3g19361 | 3:11,027,303-11,031,131 | + | C1H3g07741 | CX3g030985 | LOC_Os03g21730 | Os03g0335500 | - | Detail |
| C2H3g14995 | 3:11,038,203-11,047,766 | + | C1H3g12959 | CX3g025822 | LOC_Os03g21740 | Os03g0335600 | - | Detail |
| C2H3g07010 | 3:11,052,335-11,054,537 | - | C1H3g23089 | CX3g026449 | LOC_Os03g21790 | Os03g0336100 | FLOC3 | Detail |
| C2H3g10640 | 3:11,057,191-11,060,729 | + | C1H3g19738 | CX3g026687 | LOC_Os03g21800 | Os03g0336200 | - | Detail |
| C2H3g27830 | 3:11,063,392-11,073,976 | + | C1H3g27626 | CX3g028160 | LOC_Os03g21810 | Os03g0336300 | - | Detail |
| C2H3g18341 | 3:11,074,632-11,075,525 | - | C1H3g30217 | CX3g030935 | LOC_Os03g21820 | Os03g0336400 | - | Detail |
| C2H3g17317 | 3:11,088,575-11,091,662 | + | C1H3g28885 | CX3g028604 | LOC_Os03g21830 | Os03g0336500 | - | Detail |
| C2H3g25854 | 3:11,092,828-11,096,350 | - | C1H3g10280 | CX3g028387 | LOC_Os03g21840 | Os03g0336600 | - | Detail |
| C2H3g04362 | 3:11,100,985-11,103,212 | - | C1H3g24720 | - | LOC_Os03g04150 | - | - | Detail |
| C2H3g05433 | 3:11,113,157-11,120,267 | + | C1H3g01271 | CX3g031093 | LOC_Os03g21850 | Os03g0336700 | - | Detail |
| C2H3g01707 | 3:11,140,669-11,141,356 | - | C1H3g00780 | CX3g028881 | - | - | - | Detail |
| C2H3g29585 | 3:11,142,018-11,143,135 | + | - | - | - | - | - | Detail |
| C2H3g03273 | 3:11,144,532-11,154,769 | + | C1H3g03171 | CX3g031266 | LOC_Os03g21890 | Os03g0337500 | OsHAK8 | Detail |
| C2H3g09138 | 3:11,156,063-11,160,757 | - | C1H3g23175 | CX3g025972 | LOC_Os03g21914 | Os03g0714400 | - | Detail |
| C2H3g27608 | 3:11,162,202-11,164,456 | - | C1H3g14863 | CX3g028145 | LOC_Os03g21940 | Os03g0337800 | - | Detail |
| C2H3g02212 | 3:11,165,986-11,172,178 | - | C1H3g25051 | CX3g030549 | LOC_Os03g21950 | Os03g0337900 | - | Detail |
| C2H3g08593 | 3:11,176,431-11,179,474 | - | C1H3g24711 | CX3g028858 | LOC_Os03g21960 | Os03g0338000 | - | Detail |
| C2H3g29715 | 3:11,208,123-11,210,355 | + | C1H3g23812 | CX3g025638 | LOC_Os03g21970 | Os03g0338400 | - | Detail |
| C2H3g29506 | 3:11,212,933-11,216,502 | - | C1H3g31030 | CX3g030282 | LOC_Os03g21980 | Os03g0338600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |