| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g29289 | 6:24,618,744-24,624,679 | - | C2H6g04962 | CX6g044487 | LOC_Os06g46500 | Os06g0678800 | - | Detail |
| C1H6g18029 | 6:24,633,290-24,633,634 | - | C2H6g00139 | CX6g045315 | LOC_Os06g46560 | Os06g0679400 | - | Detail |
| C1H6g05442 | 6:24,634,551-24,635,688 | - | C2H6g00139 | CX6g045315 | LOC_Os06g46560 | Os06g0679400 | - | Detail |
| C1H6g10318 | 6:24,639,001-24,640,253 | + | C2H2g18407 | CX6g044636 | LOC_Os05g02720 | - | - | Detail |
| C1H6g06002 | 6:24,643,677-24,647,385 | + | C2H6g04537 | CX6g041450 | LOC_Os06g46570 | Os06g0679500 | - | Detail |
| C1H6g24808 | 6:24,648,161-24,648,643 | + | - | CX6g044581 | LOC_Os06g46580 | Os06g0679600 | - | Detail |
| C1H6g10559 | 6:24,648,995-24,653,129 | - | C2H6g25589 | CX6g042651 | LOC_Os06g46590 | Os06g0679700 | - | Detail |
| C1H6g03127 | 6:24,654,248-24,661,194 | + | C2H6g11527 | CX6g043258 | LOC_Os06g46600 | Os06g0679800 | - | Detail |
| C1H6g04695 | 6:24,729,993-24,735,854 | + | C2H6g06369 | CX6g041534 | LOC_Os06g46670 | Os06g0680500 | OsGLR6.12 | Detail |
| C1H6g24034 | 6:24,738,401-24,741,947 | + | C2H6g07546 | CX6g045818 | LOC_Os06g46680 | Os06g0680700 | - | Detail |
| C1H6g15452 | 6:24,747,528-24,751,347 | - | C2H6g27209 | CX6g045036 | LOC_Os06g46690 | - | - | Detail |
| C1H6g22683 | 6:24,752,465-24,755,866 | - | C2H6g05863 | CX6g042679 | LOC_Os06g46700 | Os06g0680900 | - | Detail |
| C1H6g09232 | 6:24,756,665-24,762,595 | - | C2H6g06846 | CX6g044098 | LOC_Os06g46730 | Os06g0681100 | - | Detail |
| C1H6g21904 | 6:24,765,688-24,766,654 | - | C2H6g04311 | CX6g041719 | LOC_Os06g46740 | Os06g0681200 | - | Detail |
| C1H6g09666 | 6:24,767,796-24,768,523 | - | C2H6g15200 | CX6g042992 | LOC_Os06g46754 | - | - | Detail |
| C1H6g27620 | 6:24,768,746-24,771,299 | - | C2H6g15200 | CX6g042992 | LOC_Os06g46754 | - | - | Detail |
| C1H6g06537 | 6:24,771,877-24,773,063 | - | C2H6g19032 | - | - | - | - | Detail |
| C1H6g15209 | 6:24,791,868-24,796,728 | + | C2H6g16018 | CX6g043457 | LOC_Os06g46799 | Os06g0681600 | - | Detail |
| C1H6g22995 | 6:24,798,224-24,801,438 | + | C2H6g08654 | CX6g043574 | LOC_Os06g46820 | Os06g0681700 | - | Detail |
| C1H6g31029 | 6:24,821,833-24,825,494 | - | C2H6g15213 | CX6g041690 | LOC_Os06g46880 | Os06g0682700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g14207 | 3:133,794-134,079 | - | - | CX3g030057 | - | Os03g0102000 | - | Detail |
| C2H3g00981 | 3:133,870-138,264 | + | C1H3g25020 | CX3g027602 | LOC_Os03g01230 | Os03g0102200 | - | Detail |
| C2H3g16038 | 3:142,600-153,389 | + | C1H3g05989 | CX3g029938 | LOC_Os03g01240 | Os03g0102300 | - | Detail |
| C2H3g07325 | 3:155,037-159,615 | + | C1H3g05608 | CX3g029938 | LOC_Os03g01240 | Os03g0102366 | - | Detail |
| C2H3g23495 | 3:159,429-164,729 | - | C1H3g25301 | CX3g027923 | LOC_Os03g01250 | Os03g0102400 | - | Detail |
| C2H3g09146 | 3:168,302-169,141 | - | C1H3g20737 | CX3g028399 | LOC_Os03g01260 | Os03g0102500 | - | Detail |
| C2H3g19463 | 3:174,039-175,541 | + | C1H3g18000 | CX3g030913 | LOC_Os03g01270 | Os03g0102700 | OsEXPB7 | Detail |
| C2H3g08091 | 3:184,712-188,564 | + | C1H3g03491 | CX3g027138 | LOC_Os03g01290 | Os03g0103000 | - | Detail |
| C2H3g23946 | 3:189,670-191,920 | + | - | - | - | - | - | Detail |
| C2H3g24645 | 3:196,980-197,405 | + | C1H3g01568 | CX3g025864 | LOC_Os03g01300 | Os03g0103100 | - | Detail |
| C2H3g00230 | 3:199,926-200,357 | + | C1H3g01568 | CX3g025864 | LOC_Os03g01300 | Os03g0103200 | - | Detail |
| C2H3g27129 | 3:208,983-209,564 | + | C1H3g18184 | CX3g025864 | LOC_Os03g01320 | Os03g0103300 | qLTG-3-1(t), qLTG-3-1(t), qLTG3-1, OsHyPRP05, OsHyPRP5, HyP/GRP05, HyP/GRP5 | Detail |
| C2H3g00666 | 3:218,224-219,759 | + | C1H3g24558 | CX3g025803 | - | Os03g0103400 | - | Detail |
| C2H3g07381 | 3:229,277-231,060 | + | C1H3g28077 | CX3g025211 | LOC_Os03g01530 | Os03g0105600 | - | Detail |
| C2H3g12984 | 3:233,719-235,979 | - | C1H3g23454 | CX3g026334 | LOC_Os03g01540 | Os03g0105700 | OsAHL6 | Detail |
| C2H3g00326 | 3:237,525-241,430 | - | C1H3g02722 | CX3g030126 | LOC_Os03g01550 | Os03g0105800 | - | Detail |
| C2H3g00355 | 3:244,970-247,830 | - | C1H3g03839 | CX3g030694 | LOC_Os03g01570 | Os03g0106000 | - | Detail |
| C2H3g00823 | 3:249,623-254,908 | - | C1H3g18280 | CX3g029689 | LOC_Os03g01580 | Os03g0106200 | - | Detail |
| C2H3g10053 | 3:258,131-262,210 | - | C1H3g03593 | CX3g031070 | LOC_Os03g01590 | Os03g0106300 | PAIR1, Pair1 | Detail |
| C2H3g14376 | 3:262,800-267,287 | - | C1H3g13137 | CX3g025678 | LOC_Os03g01600 | Os03g0106400 | OsBCAT1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |