| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g29289 | 6:24,618,744-24,624,679 | - | C2H6g04962 | CX6g044487 | LOC_Os06g46500 | Os06g0678800 | - | Detail |
| C1H6g18029 | 6:24,633,290-24,633,634 | - | C2H6g00139 | CX6g045315 | LOC_Os06g46560 | Os06g0679400 | - | Detail |
| C1H6g05442 | 6:24,634,551-24,635,688 | - | C2H6g00139 | CX6g045315 | LOC_Os06g46560 | Os06g0679400 | - | Detail |
| C1H6g10318 | 6:24,639,001-24,640,253 | + | C2H2g18407 | CX6g044636 | LOC_Os05g02720 | - | - | Detail |
| C1H6g06002 | 6:24,643,677-24,647,385 | + | C2H6g04537 | CX6g041450 | LOC_Os06g46570 | Os06g0679500 | - | Detail |
| C1H6g24808 | 6:24,648,161-24,648,643 | + | - | CX6g044581 | LOC_Os06g46580 | Os06g0679600 | - | Detail |
| C1H6g10559 | 6:24,648,995-24,653,129 | - | C2H6g25589 | CX6g042651 | LOC_Os06g46590 | Os06g0679700 | - | Detail |
| C1H6g03127 | 6:24,654,248-24,661,194 | + | C2H6g11527 | CX6g043258 | LOC_Os06g46600 | Os06g0679800 | - | Detail |
| C1H6g04695 | 6:24,729,993-24,735,854 | + | C2H6g06369 | CX6g041534 | LOC_Os06g46670 | Os06g0680500 | OsGLR6.12 | Detail |
| C1H6g24034 | 6:24,738,401-24,741,947 | + | C2H6g07546 | CX6g045818 | LOC_Os06g46680 | Os06g0680700 | - | Detail |
| C1H6g15452 | 6:24,747,528-24,751,347 | - | C2H6g27209 | CX6g045036 | LOC_Os06g46690 | - | - | Detail |
| C1H6g22683 | 6:24,752,465-24,755,866 | - | C2H6g05863 | CX6g042679 | LOC_Os06g46700 | Os06g0680900 | - | Detail |
| C1H6g09232 | 6:24,756,665-24,762,595 | - | C2H6g06846 | CX6g044098 | LOC_Os06g46730 | Os06g0681100 | - | Detail |
| C1H6g21904 | 6:24,765,688-24,766,654 | - | C2H6g04311 | CX6g041719 | LOC_Os06g46740 | Os06g0681200 | - | Detail |
| C1H6g09666 | 6:24,767,796-24,768,523 | - | C2H6g15200 | CX6g042992 | LOC_Os06g46754 | - | - | Detail |
| C1H6g27620 | 6:24,768,746-24,771,299 | - | C2H6g15200 | CX6g042992 | LOC_Os06g46754 | - | - | Detail |
| C1H6g06537 | 6:24,771,877-24,773,063 | - | C2H6g19032 | - | - | - | - | Detail |
| C1H6g15209 | 6:24,791,868-24,796,728 | + | C2H6g16018 | CX6g043457 | LOC_Os06g46799 | Os06g0681600 | - | Detail |
| C1H6g22995 | 6:24,798,224-24,801,438 | + | C2H6g08654 | CX6g043574 | LOC_Os06g46820 | Os06g0681700 | - | Detail |
| C1H6g31029 | 6:24,821,833-24,825,494 | - | C2H6g15213 | CX6g041690 | LOC_Os06g46880 | Os06g0682700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g05843 | 1:4,407,490-4,408,767 | + | C1H1g27970 | CX1g005975 | LOC_Os01g09730 | Os01g0193400 | - | Detail |
| C2H1g21862 | 1:4,408,888-4,411,145 | - | C1H1g11468 | CX1g003550 | LOC_Os01g09740 | Os01g0193500 | - | Detail |
| C2H1g17174 | 1:4,413,170-4,417,512 | - | C1H1g10688 | CX1g000614 | LOC_Os01g09750 | Os01g0193600 | - | Detail |
| C2H1g04548 | 1:4,423,648-4,432,522 | + | C1H1g13152 | CX1g006629 | LOC_Os01g09760 | Os01g0193900 | OsALYL1 | Detail |
| C2H1g08327 | 1:4,432,798-4,436,269 | - | C1H1g06151 | CX1g002400 | LOC_Os01g09770 | Os01g0194000 | - | Detail |
| C2H1g05163 | 1:4,446,890-4,449,014 | - | C1H1g16281 | CX1g002653 | LOC_Os01g09790 | Os01g0194200 | - | Detail |
| C2H1g20037 | 1:4,454,004-4,458,589 | - | C1H1g29130 | CX1g000713 | LOC_Os01g09800 | Os01g0194300 | NH1, OsNH1, OsNPR1, OsNPR1/NH1, NPR1, OsPR2, PR2 | Detail |
| C2H1g05731 | 1:4,471,137-4,471,517 | + | C1H1g15115 | CX1g000442 | LOC_Os01g09830 | Os01g0194600 | - | Detail |
| C2H1g26832 | 1:4,481,098-4,483,672 | + | C1H1g00947 | CX1g005498 | LOC_Os01g09850 | Os01g0195000 | OsIDD2 | Detail |
| C2H1g03615 | 1:4,491,235-4,498,330 | - | C1H1g03034 | CX1g000509 | LOC_Os01g09860 | Os01g0195200 | - | Detail |
| C2H1g17887 | 1:4,508,755-4,509,393 | - | C1H1g10561 | CX1g001794 | LOC_Os01g09870 | Os01g0195300 | - | Detail |
| C2H1g12953 | 1:4,510,080-4,512,668 | - | - | - | - | - | - | Detail |
| C2H1g30117 | 1:4,514,337-4,515,203 | - | C1H1g31641 | CX1g003898 | LOC_Os01g09880 | Os01g0195400 | - | Detail |
| C2H1g28884 | 1:4,521,724-4,524,029 | - | C1H1g28666 | CX1g000703 | LOC_Os01g09890 | Os01g0195500 | - | Detail |
| C2H1g00669 | 1:4,526,288-4,526,542 | + | C1H1g30631 | - | - | - | - | Detail |
| C2H1g23471 | 1:4,532,493-4,532,820 | + | C1H1g18771 | CX1g006997 | LOC_Os01g09900 | Os01g0195700 | - | Detail |
| C2H1g25043 | 1:4,532,942-4,533,980 | + | C1H1g02897 | CX1g006997 | LOC_Os01g09900 | Os01g0195801 | - | Detail |
| C2H1g19433 | 1:4,541,970-4,542,264 | - | C1H1g13131 | CX12g016171 | LOC_Os12g41650 | Os12g0610200 | OsPIL11, OsbHLH102 | Detail |
| C2H1g29514 | 1:4,549,728-4,555,017 | + | C1H1g28746 | CX1g006997 | LOC_Os01g09930 | Os01g0196300 | DPF, OsbHLH025 | Detail |
| C2H1g19303 | 1:4,570,603-4,572,287 | + | C1H1g18771 | CX1g006997 | LOC_Os01g09990 | Os01g0196300 | DPF, OsbHLH025 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |