| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g00346 | 6:24,404,316-24,405,485 | + | - | - | - | Os06g0675300 | - | Detail |
| C1H6g03218 | 6:24,421,355-24,425,049 | + | C2H6g16522 | CX6g042717 | LOC_Os06g46270 | Os06g0675600 | OsY37, ONAC011 | Detail |
| C1H6g05246 | 6:24,430,711-24,441,204 | - | C2H6g30405 | CX6g041293 | LOC_Os06g46340 | Os06g0676700 | - | Detail |
| C1H6g05961 | 6:24,442,175-24,449,152 | - | C2H6g20637 | CX6g043872 | LOC_Os06g46310 | Os06g0676000 | NRAMP3, OsNramp3, OsNRAMP3 | Detail |
| C1H6g12474 | 6:24,470,389-24,472,453 | - | C2H6g24034 | CX6g042075 | LOC_Os06g46330 | Os06g0676600 | - | Detail |
| C1H6g29534 | 6:24,480,900-24,485,329 | + | C2H6g04890 | CX6g041293 | LOC_Os06g46340 | Os06g0676700 | - | Detail |
| C1H6g30642 | 6:24,488,133-24,490,098 | - | C2H6g08388 | CX6g042639 | LOC_Os06g46350 | Os06g0677000 | DEP3, OspPLAIIIδ | Detail |
| C1H6g11720 | 6:24,513,318-24,517,704 | + | C2H6g24564 | CX6g043789 | LOC_Os06g46366 | Os06g0677300 | - | Detail |
| C1H6g31002 | 6:24,518,820-24,522,154 | + | C2H6g27620 | CX6g045150 | LOC_Os06g46372 | Os06g0677400 | - | Detail |
| C1H6g05901 | 6:24,523,528-24,527,946 | + | C2H6g16974 | CX6g042145 | LOC_Os06g46380 | Os06g0677500 | - | Detail |
| C1H6g18418 | 6:24,528,831-24,529,181 | - | C2H6g10162 | CX6g042294 | LOC_Os06g46390 | Os06g0677600 | - | Detail |
| C1H6g07635 | 6:24,530,929-24,535,986 | + | C2H6g18268 | CX6g042249 | LOC_Os06g46400 | Os06g0677700 | - | Detail |
| C1H6g07372 | 6:24,538,083-24,544,254 | - | C2H6g18312 | CX6g043778 | LOC_Os06g46410 | Os06g0677800 | OsARF17 | Detail |
| C1H6g28341 | 6:24,565,039-24,566,301 | + | C2H6g19101 | CX6g045136 | LOC_Os06g46440 | Os06g0678100 | - | Detail |
| C1H6g28764 | 6:24,566,533-24,571,907 | - | C2H6g22903 | CX6g043297 | LOC_Os06g46450 | Os06g0678200 | OsSPS1 | Detail |
| C1H6g19095 | 6:24,580,013-24,580,366 | + | - | CX6g045775 | LOC_Os06g46460 | Os06g0678500 | - | Detail |
| C1H6g09244 | 6:24,587,122-24,593,084 | - | C2H6g14411 | CX6g045884 | LOC_Os06g46475 | Os06g0678650 | - | Detail |
| C1H6g03373 | 6:24,595,611-24,605,419 | - | C2H6g03321 | CX6g045884 | LOC_Os02g06725 | - | - | Detail |
| C1H6g16196 | 6:24,606,247-24,612,389 | - | C2H6g12298 | - | LOC_Os06g46480 | Os06g0678700 | - | Detail |
| C1H6g30532 | 6:24,616,741-24,618,162 | - | C2H6g12298 | - | LOC_Os06g46480 | Os06g0678700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22787 | 4:21,251,967-21,255,730 | + | C1H4g27682 | CX4g031686 | LOC_Os04g41500 | Os04g0492400 | - | Detail |
| C2H4g27511 | 4:21,256,106-21,271,309 | + | C1H4g23200 | CX4g036315 | LOC_Os04g41510 | Os04g0492500 | - | Detail |
| C2H4g03072 | 4:21,274,481-21,275,248 | + | C1H4g00637 | CX4g035635 | LOC_Os04g41540 | Os04g0492800 | - | Detail |
| C2H4g14526 | 4:21,278,683-21,278,955 | - | - | - | - | - | - | Detail |
| C2H4g11011 | 4:21,278,716-21,282,560 | + | C1H4g21073 | CX4g033186 | LOC_Os04g41550 | Os04g0492900 | - | Detail |
| C2H4g23397 | 4:21,282,921-21,283,931 | - | C1H4g24972 | CX4g035048 | LOC_Os04g41560 | Os04g0493000 | OsBBX11 | Detail |
| C2H4g12805 | 4:21,288,937-21,289,857 | - | C1H4g20351 | CX4g036488 | LOC_Os04g41570 | Os04g0493100 | - | Detail |
| C2H4g13607 | 4:21,301,452-21,304,544 | - | C1H4g27725 | CX4g036094 | LOC_Os04g41580 | Os04g0493300 | - | Detail |
| C2H4g26460 | 4:21,310,487-21,310,858 | - | C1H4g28922 | CX4g034458 | LOC_Os04g41620 | Os04g0493400 | OsChia2b, Cht4 | Detail |
| C2H4g25846 | 4:21,311,343-21,311,633 | - | C1H4g28922 | CX4g034458 | LOC_Os04g41620 | Os04g0493400 | OsChia2b, Cht4 | Detail |
| C2H4g19317 | 4:21,313,827-21,314,102 | - | C1H4g13597 | CX4g032644 | LOC_Os04g41640 | Os04g0493600 | - | Detail |
| C2H4g19448 | 4:21,318,487-21,319,448 | - | C1H4g17237 | CX4g032644 | LOC_Os04g41680 | Os04g0494100 | OsChia4a, Cht5 | Detail |
| C2H4g22711 | 4:21,326,916-21,329,351 | + | C1H4g09263 | - | LOC_Os04g41710 | Os04g0494600 | - | Detail |
| C2H4g14372 | 4:21,338,117-21,339,541 | + | C1H4g07021 | - | LOC_Os04g41740 | Os04g0494800 | - | Detail |
| C2H4g03458 | 4:21,341,851-21,343,237 | + | C1H4g11237 | - | LOC_Os04g41750 | Os04g0494900 | - | Detail |
| C2H4g08263 | 4:21,344,041-21,345,389 | + | C1H4g16985 | - | LOC_Os04g41759 | Os04g0494950 | - | Detail |
| C2H4g02443 | 4:21,348,846-21,351,436 | + | C1H4g18754 | - | LOC_Os04g41770 | Os04g0495000 | - | Detail |
| C2H4g21095 | 4:21,360,411-21,360,899 | + | - | CX4g031634 | LOC_Os04g41800 | Os04g0495300 | - | Detail |
| C2H4g12186 | 4:21,365,940-21,369,076 | + | C1H4g14867 | CX4g036530 | LOC_Os04g41810 | Os04g0495400 | - | Detail |
| C2H4g17209 | 4:21,369,465-21,372,944 | - | C1H4g27163 | CX4g035960 | LOC_Os04g41820 | Os04g0495500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |