| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g00346 | 6:24,404,316-24,405,485 | + | - | - | - | Os06g0675300 | - | Detail |
| C1H6g03218 | 6:24,421,355-24,425,049 | + | C2H6g16522 | CX6g042717 | LOC_Os06g46270 | Os06g0675600 | OsY37, ONAC011 | Detail |
| C1H6g05246 | 6:24,430,711-24,441,204 | - | C2H6g30405 | CX6g041293 | LOC_Os06g46340 | Os06g0676700 | - | Detail |
| C1H6g05961 | 6:24,442,175-24,449,152 | - | C2H6g20637 | CX6g043872 | LOC_Os06g46310 | Os06g0676000 | NRAMP3, OsNramp3, OsNRAMP3 | Detail |
| C1H6g12474 | 6:24,470,389-24,472,453 | - | C2H6g24034 | CX6g042075 | LOC_Os06g46330 | Os06g0676600 | - | Detail |
| C1H6g29534 | 6:24,480,900-24,485,329 | + | C2H6g04890 | CX6g041293 | LOC_Os06g46340 | Os06g0676700 | - | Detail |
| C1H6g30642 | 6:24,488,133-24,490,098 | - | C2H6g08388 | CX6g042639 | LOC_Os06g46350 | Os06g0677000 | DEP3, OspPLAIIIδ | Detail |
| C1H6g11720 | 6:24,513,318-24,517,704 | + | C2H6g24564 | CX6g043789 | LOC_Os06g46366 | Os06g0677300 | - | Detail |
| C1H6g31002 | 6:24,518,820-24,522,154 | + | C2H6g27620 | CX6g045150 | LOC_Os06g46372 | Os06g0677400 | - | Detail |
| C1H6g05901 | 6:24,523,528-24,527,946 | + | C2H6g16974 | CX6g042145 | LOC_Os06g46380 | Os06g0677500 | - | Detail |
| C1H6g18418 | 6:24,528,831-24,529,181 | - | C2H6g10162 | CX6g042294 | LOC_Os06g46390 | Os06g0677600 | - | Detail |
| C1H6g07635 | 6:24,530,929-24,535,986 | + | C2H6g18268 | CX6g042249 | LOC_Os06g46400 | Os06g0677700 | - | Detail |
| C1H6g07372 | 6:24,538,083-24,544,254 | - | C2H6g18312 | CX6g043778 | LOC_Os06g46410 | Os06g0677800 | OsARF17 | Detail |
| C1H6g28341 | 6:24,565,039-24,566,301 | + | C2H6g19101 | CX6g045136 | LOC_Os06g46440 | Os06g0678100 | - | Detail |
| C1H6g28764 | 6:24,566,533-24,571,907 | - | C2H6g22903 | CX6g043297 | LOC_Os06g46450 | Os06g0678200 | OsSPS1 | Detail |
| C1H6g19095 | 6:24,580,013-24,580,366 | + | - | CX6g045775 | LOC_Os06g46460 | Os06g0678500 | - | Detail |
| C1H6g09244 | 6:24,587,122-24,593,084 | - | C2H6g14411 | CX6g045884 | LOC_Os06g46475 | Os06g0678650 | - | Detail |
| C1H6g03373 | 6:24,595,611-24,605,419 | - | C2H6g03321 | CX6g045884 | LOC_Os02g06725 | - | - | Detail |
| C1H6g16196 | 6:24,606,247-24,612,389 | - | C2H6g12298 | - | LOC_Os06g46480 | Os06g0678700 | - | Detail |
| C1H6g30532 | 6:24,616,741-24,618,162 | - | C2H6g12298 | - | LOC_Os06g46480 | Os06g0678700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g04555 | 4:14,527,353-14,528,913 | + | C1H4g01732 | CX4g031772 | LOC_Os04g28990 | Os04g0359100 | - | Detail |
| C2H4g18096 | 4:14,552,693-14,554,676 | + | C1H4g14057 | CX4g031772 | LOC_Os04g29030 | Os04g0359700 | - | Detail |
| C2H4g27829 | 4:14,582,673-14,587,234 | - | C1H4g23432 | CX4g032592 | LOC_Os04g29090 | Os04g0360500 | - | Detail |
| C2H4g25764 | 4:14,587,984-14,592,804 | - | - | - | - | - | - | Detail |
| C2H4g15795 | 4:14,742,433-14,744,253 | - | C1H4g21615 | CX4g034254 | - | Os04g0363700 | - | Detail |
| C2H4g03810 | 4:14,786,346-14,786,891 | + | C1H4g10002 | CX4g036086 | LOC_Os04g29950 | Os04g0365100 | - | Detail |
| C2H4g08882 | 4:14,790,894-14,794,307 | + | C1H4g11644 | CX4g036086 | LOC_Os04g30010 | Os04g0365100 | - | Detail |
| C2H4g05483 | 4:14,856,558-14,857,105 | - | C1H4g11644 | CX4g036156 | LOC_Os04g30240 | Os04g0366000 | - | Detail |
| C2H4g06191 | 4:15,052,311-15,057,064 | - | C1H4g01491 | CX4g035129 | LOC_Os04g30360 | Os04g0367201 | - | Detail |
| C2H4g19842 | 4:15,072,893-15,074,080 | + | C1H4g05945 | CX4g036217 | LOC_Os04g29920 | Os04g0367400 | - | Detail |
| C2H4g09256 | 4:15,080,080-15,081,117 | - | C1H4g22817 | CX4g035931 | LOC_Os04g30160 | Os04g0368000 | - | Detail |
| C2H4g30553 | 4:15,082,529-15,083,452 | - | C1H4g22817 | CX4g035931 | LOC_Os04g30360 | Os04g0367900 | - | Detail |
| C2H4g09401 | 4:15,098,392-15,101,020 | - | C1H4g03650 | CX4g035309 | LOC_Os04g30160 | Os04g0368000 | - | Detail |
| C2H4g11929 | 4:15,128,397-15,130,189 | - | C1H4g03650 | CX4g035309 | LOC_Os04g30160 | Os04g0368300 | - | Detail |
| C2H4g06332 | 4:15,130,904-15,131,815 | - | C1H4g01982 | CX4g035309 | LOC_Os04g30160 | Os04g0368300 | - | Detail |
| C2H4g00907 | 4:15,146,542-15,149,640 | - | C1H4g03650 | CX4g035309 | LOC_Os04g30240 | Os04g0368800 | - | Detail |
| C2H4g18237 | 4:15,198,650-15,201,834 | - | C1H4g22817 | CX4g035931 | LOC_Os04g30370 | Os04g0367900 | - | Detail |
| C2H4g22616 | 4:15,219,276-15,222,438 | + | C1H4g03650 | CX4g033563 | LOC_Os04g30360 | Os04g0372100 | - | Detail |
| C2H4g06280 | 4:15,229,416-15,229,526 | + | - | - | - | - | - | Detail |
| C2H4g02498 | 4:15,265,477-15,269,685 | + | C1H4g15913 | CX4g031772 | LOC_Os04g30420 | Os04g0372700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |