| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08444 | 1:26,184,954-26,189,082 | - | C2H1g23172 | CX1g007119 | LOC_Os01g51040 | Os01g0706700 | - | Detail |
| C1H1g15814 | 1:26,194,129-26,200,254 | - | C2H1g02706 | CX1g001598 | LOC_Os01g51060 | Os01g0706900 | OsAH9 | Detail |
| C1H1g28612 | 1:26,210,151-26,213,006 | + | C2H1g05617 | CX1g002795 | LOC_Os01g51120 | Os01g0707300 | - | Detail |
| C1H1g30984 | 1:26,220,859-26,223,538 | - | C2H1g03133 | - | - | - | - | Detail |
| C1H1g10432 | 1:26,245,495-26,250,870 | + | C2H1g10394 | CX1g000030 | LOC_Os01g51154 | Os01g0708000 | OsTRBF3 | Detail |
| C1H1g24014 | 1:26,253,508-26,254,043 | - | C2H1g22584 | - | - | - | - | Detail |
| C1H1g02406 | 1:26,256,328-26,260,482 | + | C2H1g18203 | CX1g003591 | LOC_Os01g51190 | Os01g0708300 | - | Detail |
| C1H1g30931 | 1:26,263,871-26,268,797 | + | C2H1g14381 | CX1g000162 | LOC_Os01g51200 | Os01g0570500 | - | Detail |
| C1H1g26666 | 1:26,269,980-26,272,046 | - | C2H1g25316 | CX1g006316 | LOC_Os01g51210 | Os01g0708500 | - | Detail |
| C1H1g09706 | 1:26,273,334-26,279,392 | + | C2H1g12880 | CX1g002967 | LOC_Os01g51220 | Os01g0708600 | - | Detail |
| C1H1g20984 | 1:26,280,248-26,282,369 | - | C2H1g01487 | CX1g004777 | LOC_Os01g51230 | Os01g0708700 | - | Detail |
| C1H1g24856 | 1:26,287,216-26,291,048 | + | C2H1g11902 | CX1g006124 | LOC_Os01g51250 | Os01g0708900 | - | Detail |
| C1H1g05640 | 1:26,297,244-26,298,775 | + | C2H1g26791 | CX1g004079 | LOC_Os01g51260 | Os01g0709000 | Os2R_MYB13 | Detail |
| C1H1g15780 | 1:26,304,743-26,307,713 | + | C2H1g16264 | CX1g006026 | LOC_Os01g51280 | Os01g0709400 | - | Detail |
| C1H1g31428 | 1:26,308,838-26,317,961 | - | C2H1g08623 | CX1g007054 | LOC_Os01g51290 | Os01g0709500 | - | Detail |
| C1H1g30106 | 1:26,327,403-26,333,197 | + | C2H1g14661 | CX1g001712 | LOC_Os01g51300 | Os01g0710000 | OsFVE, OsRBAP1, BGSD-2 | Detail |
| C1H1g02532 | 1:26,348,249-26,349,302 | - | C2H1g15591 | CX1g003098 | LOC_Os01g51330 | Os01g0710300 | - | Detail |
| C1H1g13107 | 1:26,355,244-26,358,756 | - | C2H1g12753 | CX1g004556 | - | Os01g0852650 | - | Detail |
| C1H1g29431 | 1:26,359,096-26,361,690 | - | C2H1g11214 | CX1g000647 | LOC_Os01g51360 | Os01g0710700 | - | Detail |
| C1H1g22136 | 1:26,363,196-26,368,886 | + | C2H1g10466 | CX1g002177 | LOC_Os01g51380 | Os01g0711000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25606 | 3:5,617,924-5,626,626 | - | C1H3g11455 | CX3g031100 | LOC_Os03g12160 | Os03g0221800 | - | Detail |
| C2H3g28200 | 3:5,629,758-5,631,757 | - | C1H3g05328 | CX3g028642 | LOC_Os03g12180 | Os03g0222100 | - | Detail |
| C2H3g21744 | 3:5,655,861-5,657,114 | + | C1H3g10920 | - | LOC_Os03g12210 | Os03g0222500 | - | Detail |
| C2H3g09344 | 3:5,664,107-5,666,372 | + | C1H3g07232 | CX3g031317 | LOC_Os03g12230 | Os03g0222600 | - | Detail |
| C2H3g04698 | 3:5,668,849-5,673,629 | + | C1H3g04972 | CX3g028958 | LOC_Os03g12236 | Os03g0222700 | - | Detail |
| C2H3g19892 | 3:5,674,920-5,676,941 | + | C1H3g26972 | CX3g027447 | LOC_Os03g12238 | - | - | Detail |
| C2H3g10667 | 3:5,679,824-5,684,019 | + | C1H3g14957 | CX3g031278 | LOC_Os03g12250 | Os03g0223000 | - | Detail |
| C2H3g29015 | 3:5,690,854-5,692,440 | - | C1H3g14297 | CX3g030840 | LOC_Os03g12260 | Os03g0223100 | CYP94D15, OsCYP94D15 | Detail |
| C2H3g13113 | 3:5,697,671-5,700,203 | + | C1H3g13087 | CX3g029663 | LOC_Os03g12270 | Os03g0223200 | - | Detail |
| C2H3g16993 | 3:5,702,030-5,703,478 | - | C1H3g19225 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C2H3g28472 | 3:5,703,831-5,706,150 | - | C1H3g05930 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C2H3g01042 | 3:5,710,893-5,718,986 | - | C1H3g02751 | CX3g025777 | LOC_Os03g12300 | Os03g0223700 | - | Detail |
| C2H3g20060 | 3:5,730,175-5,734,820 | + | C1H3g05662 | CX3g029397 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| C2H3g29213 | 3:5,743,380-5,748,702 | + | C1H3g16565 | CX3g029992 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| C2H3g11335 | 3:5,749,246-5,753,687 | - | C1H3g12418 | CX3g029383 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| C2H3g05885 | 3:5,765,625-5,769,411 | + | C1H3g18389 | CX3g025920 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| C2H3g25300 | 3:5,773,342-5,774,361 | - | C1H3g09012 | CX3g025136 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| C2H3g05543 | 3:5,781,025-5,785,623 | - | C1H3g14793 | CX3g027495 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| C2H3g22350 | 3:5,787,025-5,788,437 | - | C1H3g12506 | CX3g027176 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| C2H3g21341 | 3:5,789,758-5,791,688 | + | C1H3g26939 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |