| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08444 | 1:26,184,954-26,189,082 | - | C2H1g23172 | CX1g007119 | LOC_Os01g51040 | Os01g0706700 | - | Detail |
| C1H1g15814 | 1:26,194,129-26,200,254 | - | C2H1g02706 | CX1g001598 | LOC_Os01g51060 | Os01g0706900 | OsAH9 | Detail |
| C1H1g28612 | 1:26,210,151-26,213,006 | + | C2H1g05617 | CX1g002795 | LOC_Os01g51120 | Os01g0707300 | - | Detail |
| C1H1g30984 | 1:26,220,859-26,223,538 | - | C2H1g03133 | - | - | - | - | Detail |
| C1H1g10432 | 1:26,245,495-26,250,870 | + | C2H1g10394 | CX1g000030 | LOC_Os01g51154 | Os01g0708000 | OsTRBF3 | Detail |
| C1H1g24014 | 1:26,253,508-26,254,043 | - | C2H1g22584 | - | - | - | - | Detail |
| C1H1g02406 | 1:26,256,328-26,260,482 | + | C2H1g18203 | CX1g003591 | LOC_Os01g51190 | Os01g0708300 | - | Detail |
| C1H1g30931 | 1:26,263,871-26,268,797 | + | C2H1g14381 | CX1g000162 | LOC_Os01g51200 | Os01g0570500 | - | Detail |
| C1H1g26666 | 1:26,269,980-26,272,046 | - | C2H1g25316 | CX1g006316 | LOC_Os01g51210 | Os01g0708500 | - | Detail |
| C1H1g09706 | 1:26,273,334-26,279,392 | + | C2H1g12880 | CX1g002967 | LOC_Os01g51220 | Os01g0708600 | - | Detail |
| C1H1g20984 | 1:26,280,248-26,282,369 | - | C2H1g01487 | CX1g004777 | LOC_Os01g51230 | Os01g0708700 | - | Detail |
| C1H1g24856 | 1:26,287,216-26,291,048 | + | C2H1g11902 | CX1g006124 | LOC_Os01g51250 | Os01g0708900 | - | Detail |
| C1H1g05640 | 1:26,297,244-26,298,775 | + | C2H1g26791 | CX1g004079 | LOC_Os01g51260 | Os01g0709000 | Os2R_MYB13 | Detail |
| C1H1g15780 | 1:26,304,743-26,307,713 | + | C2H1g16264 | CX1g006026 | LOC_Os01g51280 | Os01g0709400 | - | Detail |
| C1H1g31428 | 1:26,308,838-26,317,961 | - | C2H1g08623 | CX1g007054 | LOC_Os01g51290 | Os01g0709500 | - | Detail |
| C1H1g30106 | 1:26,327,403-26,333,197 | + | C2H1g14661 | CX1g001712 | LOC_Os01g51300 | Os01g0710000 | OsFVE, OsRBAP1, BGSD-2 | Detail |
| C1H1g02532 | 1:26,348,249-26,349,302 | - | C2H1g15591 | CX1g003098 | LOC_Os01g51330 | Os01g0710300 | - | Detail |
| C1H1g13107 | 1:26,355,244-26,358,756 | - | C2H1g12753 | CX1g004556 | - | Os01g0852650 | - | Detail |
| C1H1g29431 | 1:26,359,096-26,361,690 | - | C2H1g11214 | CX1g000647 | LOC_Os01g51360 | Os01g0710700 | - | Detail |
| C1H1g22136 | 1:26,363,196-26,368,886 | + | C2H1g10466 | CX1g002177 | LOC_Os01g51380 | Os01g0711000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08088 | 1:23,044,591-23,047,367 | + | C1H1g31055 | CX1g002458 | LOC_Os01g45350 | Os01g0640600 | - | Detail |
| C2H1g22980 | 1:23,046,848-23,048,906 | - | C1H1g10058 | CX1g004617 | LOC_Os01g45360 | Os01g0640700 | - | Detail |
| C2H1g13504 | 1:23,051,648-23,054,849 | - | C1H1g19962 | CX1g003997 | LOC_Os01g45370 | Os01g0640800 | - | Detail |
| C2H1g09207 | 1:23,055,650-23,059,742 | + | C1H1g17185 | CX1g000116 | LOC_Os01g45380 | Os01g0641000 | - | Detail |
| C2H1g17482 | 1:23,061,086-23,064,129 | + | C1H1g25061 | CX1g004780 | LOC_Os01g45390 | Os01g0641100 | - | Detail |
| C2H1g02385 | 1:23,078,541-23,081,482 | - | C1H1g31552 | CX1g004195 | LOC_Os01g45439 | Os01g0641700 | - | Detail |
| C2H1g03402 | 1:23,086,625-23,088,923 | + | C1H1g00902 | CX1g003051 | LOC_Os01g45450 | Os01g0641800 | - | Detail |
| C2H1g07647 | 1:23,090,833-23,091,147 | + | C1H1g12918 | CX1g005344 | LOC_Os01g45460 | Os01g0642000 | - | Detail |
| C2H1g14331 | 1:23,091,174-23,098,582 | + | C1H1g12918 | CX1g005344 | LOC_Os01g45460 | Os01g0642100 | - | Detail |
| C2H1g23910 | 1:23,098,762-23,099,498 | - | C1H1g06064 | - | LOC_Os01g45470 | Os01g0642200 | - | Detail |
| C2H1g05902 | 1:23,132,843-23,134,398 | + | C1H1g02209 | CX1g000192 | LOC_Os01g45520 | Os01g0642801 | - | Detail |
| C2H1g10748 | 1:23,134,990-23,137,497 | - | C1H1g26078 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C2H1g09079 | 1:23,137,588-23,138,064 | - | C1H1g26078 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C2H1g05185 | 1:23,155,106-23,159,500 | + | C1H1g21876 | CX1g003646 | LOC_Os01g45550 | Os01g0643300 | - | Detail |
| C2H1g02636 | 1:23,170,308-23,173,345 | - | C1H1g25133 | CX1g003628 | LOC_Os01g45570 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| C2H1g17274 | 1:23,188,624-23,193,473 | - | C1H1g17824 | CX1g005269 | LOC_Os01g45620 | Os01g0643800 | - | Detail |
| C2H1g01755 | 1:23,197,092-23,198,684 | + | C1H1g14596 | CX1g004663 | LOC_Os01g45640 | Os01g0644000 | - | Detail |
| C2H1g00660 | 1:23,216,768-23,217,823 | - | C1H1g08154 | CX1g003016 | LOC_Os01g45730 | Os01g0645000 | - | Detail |
| C2H1g06994 | 1:23,226,508-23,233,386 | + | C1H1g06404 | CX1g001972 | LOC_Os01g45750 | Os01g0645200 | - | Detail |
| C2H1g23683 | 1:23,246,717-23,248,981 | + | C1H1g20018 | CX1g005018 | LOC_Os01g45760 | Os01g0645400 | YUCCA1, OsYUCCA1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |