| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g00232 | 1:1,609,125-1,609,574 | - | C2H1g10047 | CX1g002909 | LOC_Os01g04360 | Os01g0136000 | OsHSP16.9C | Detail |
| C1H1g20613 | 1:1,614,373-1,614,825 | - | C2H1g25836 | CX1g002909 | LOC_Os01g04370 | Os01g0136100 | OsHsp16.9A | Detail |
| C1H1g21666 | 1:1,624,685-1,625,971 | - | C2H1g20283 | CX1g001507 | LOC_Os01g04409 | Os01g0136400 | - | Detail |
| C1H1g31675 | 1:1,625,974-1,628,434 | - | C2H1g05664 | CX1g001507 | LOC_Os01g04490 | Os01g0137282 | - | Detail |
| C1H1g15521 | 1:1,628,796-1,629,566 | - | C2H1g28040 | CX1g000380 | LOC_Os01g04480 | Os01g0136450 | - | Detail |
| C1H1g03585 | 1:1,630,063-1,632,084 | - | C2H1g23051 | CX1g000380 | LOC_Os01g04530 | Os01g0136500 | - | Detail |
| C1H1g05135 | 1:1,634,865-1,635,695 | - | C2H1g27877 | CX1g000380 | LOC_Os01g04409 | Os01g0136400 | - | Detail |
| C1H1g14838 | 1:1,636,768-1,637,541 | - | C2H1g07350 | CX1g000380 | LOC_Os01g04430 | Os01g0136900 | - | Detail |
| C1H1g19619 | 1:1,640,636-1,644,159 | - | C2H1g17615 | CX1g000380 | LOC_Os01g04440 | Os01g0137700 | - | Detail |
| C1H1g04699 | 1:1,644,631-1,649,194 | - | C2H1g04457 | CX1g001507 | LOC_Os01g04450 | Os01g0136800 | - | Detail |
| C1H1g13476 | 1:1,651,079-1,653,101 | + | C2H1g03343 | CX1g004864 | LOC_Os01g04460 | Os01g0136900 | - | Detail |
| C1H1g03380 | 1:1,657,674-1,658,363 | + | C2H1g28040 | CX1g000380 | LOC_Os01g04470 | Os01g0137400 | - | Detail |
| C1H1g12367 | 1:1,663,244-1,663,916 | - | - | - | - | - | - | Detail |
| C1H1g13787 | 1:1,664,203-1,666,377 | + | C2H1g24458 | CX1g004882 | LOC_Os01g04550 | Os01g0137250 | - | Detail |
| C1H1g05966 | 1:1,667,350-1,671,776 | + | C2H1g15120 | CX1g001507 | LOC_Os01g04490 | Os01g0137282 | - | Detail |
| C1H1g04315 | 1:1,678,866-1,680,950 | + | C2H1g12949 | CX1g004864 | LOC_Os01g04520 | Os01g0137500 | - | Detail |
| C1H1g23883 | 1:1,683,991-1,684,707 | + | C2H1g23051 | CX1g000380 | LOC_Os01g04530 | Os01g0136500 | - | Detail |
| C1H1g29010 | 1:1,687,509-1,690,218 | + | C2H1g15120 | CX1g000582 | LOC_Os01g04550 | Os01g0137950 | - | Detail |
| C1H1g12602 | 1:1,698,232-1,701,717 | + | C2H1g04428 | CX1g004864 | LOC_Os01g04580 | Os01g0138400 | - | Detail |
| C1H1g28723 | 1:1,703,397-1,706,267 | + | C2H1g23235 | CX1g001331 | LOC_Os01g04590 | Os01g0138500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08417 | 2:2,303,926-2,311,206 | + | C1H2g01626 | CX2g022091 | LOC_Os02g05040 | Os02g0143200 | - | Detail |
| C2H2g29044 | 2:2,326,035-2,331,705 | + | C1H2g20326 | - | - | - | - | Detail |
| C2H2g15830 | 2:2,331,756-2,337,013 | + | C1H2g05324 | CX2g020466 | LOC_Os02g05310 | Os02g0146400 | - | Detail |
| C2H2g06566 | 2:2,337,342-2,342,078 | + | C1H2g12282 | CX2g020302 | LOC_Os02g05320 | Os02g0146500 | - | Detail |
| C2H2g08642 | 2:2,344,474-2,347,835 | + | C1H2g18676 | CX2g020037 | LOC_Os02g05330 | Os02g0146600 | OseIF4A | Detail |
| C2H2g07340 | 2:2,351,364-2,359,090 | + | C1H2g28134 | CX2g019608 | LOC_Os02g05340 | Os02g0146700 | - | Detail |
| C2H2g09483 | 2:2,361,124-2,361,397 | + | - | - | - | - | - | Detail |
| C2H2g18915 | 2:2,361,453-2,365,801 | + | C1H2g16834 | CX2g022971 | LOC_Os02g05365 | Os02g0147700 | - | Detail |
| C2H2g16746 | 2:2,367,495-2,373,379 | + | C1H2g17406 | CX2g021512 | LOC_Os02g05450 | Os02g0147800 | - | Detail |
| C2H2g05031 | 2:2,385,281-2,388,231 | + | C1H2g03103 | CX2g019418 | LOC_Os02g05470 | Os02g0148000 | - | Detail |
| C2H2g17640 | 2:2,389,987-2,393,274 | - | C1H2g11400 | CX2g020633 | LOC_Os02g05480 | Os02g0148100 | OsMAPK14, OsMPK3, OsMAPK33 | Detail |
| C2H2g26711 | 2:2,398,964-2,409,479 | + | C1H2g29322 | CX2g019230 | LOC_Os02g05490 | Os02g0148300 | - | Detail |
| C2H2g18156 | 2:2,410,020-2,412,843 | + | C1H2g28836 | CX2g021446 | LOC_Os02g05500 | Os02g0148400 | - | Detail |
| C2H2g30595 | 2:2,414,221-2,417,726 | + | C1H2g30011 | CX2g024552 | LOC_Os02g05510 | Os02g0148500 | - | Detail |
| C2H2g05427 | 2:2,418,499-2,420,814 | + | C1H2g12590 | CX2g023405 | LOC_Os02g05520 | Os02g0148600 | - | Detail |
| C2H2g26407 | 2:2,427,921-2,428,679 | + | C1H2g04797 | CX2g022702 | LOC_Os02g05600 | Os02g0149500 | - | Detail |
| C2H2g19048 | 2:2,434,730-2,439,152 | + | C1H2g28291 | CX2g024920 | LOC_Os02g05610 | Os02g0149600 | - | Detail |
| C2H2g28510 | 2:2,449,680-2,452,843 | + | C1H2g12792 | CX2g021786 | LOC_Os02g05630 | Os02g0149800 | OsPP2C10, PP2C10, OsPP18 | Detail |
| C2H2g30382 | 2:2,464,142-2,465,378 | + | C1H2g24221 | CX2g022836 | LOC_Os02g05640 | Os02g0149900 | - | Detail |
| C2H2g12819 | 2:2,467,140-2,469,636 | - | C1H2g30137 | CX2g019305 | LOC_Os02g05650 | Os02g0150000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |