| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g11972 | 6:23,677,862-23,679,855 | - | C2H6g29043 | CX6g043798 | LOC_Os06g45140 | Os06g0662200 | OsbZIP52, OsbZIP52/RISBZ5, RISBZ5 | Detail |
| C1H6g29265 | 6:23,682,020-23,682,232 | - | - | CX6g045194 | LOC_Os06g45210 | Os06g0662225 | - | Detail |
| C1H6g25624 | 6:23,685,289-23,685,645 | - | - | CX6g045194 | LOC_Os06g45210 | Os06g0662300 | - | Detail |
| C1H6g11744 | 6:23,695,872-23,698,362 | - | - | CX6g045194 | LOC_Os06g45290 | Os06g0662700 | - | Detail |
| C1H6g11913 | 6:23,699,392-23,699,745 | - | - | CX6g045194 | LOC_Os06g45180 | Os06g0662500 | - | Detail |
| C1H6g18698 | 6:23,700,831-23,701,647 | - | C2H3g00405 | CX3g025489 | - | - | - | Detail |
| C1H6g14371 | 6:23,703,041-23,703,394 | - | - | CX6g045194 | LOC_Os06g45210 | Os06g0662850 | - | Detail |
| C1H6g26626 | 6:23,705,205-23,708,764 | - | C2H6g13472 | CX6g045381 | LOC_Os06g45240 | Os06g0663000 | - | Detail |
| C1H6g07836 | 6:23,711,337-23,715,176 | - | C2H6g07889 | CX6g043246 | LOC_Os06g45250 | Os06g0663100 | - | Detail |
| C1H6g25311 | 6:23,715,951-23,721,308 | - | C2H6g25016 | CX6g043895 | LOC_Os06g45280 | Os06g0663200 | - | Detail |
| C1H6g07255 | 6:23,734,145-23,736,547 | + | C2H6g04522 | CX6g044109 | LOC_Os06g45300 | Os06g0663400 | - | Detail |
| C1H6g04964 | 6:23,740,627-23,741,091 | - | C2H6g09171 | CX6g042273 | LOC_Os06g45310 | Os06g0663500 | - | Detail |
| C1H6g11988 | 6:23,747,700-23,751,199 | - | C2H6g13796 | CX6g041502 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| C1H6g24851 | 6:23,752,422-23,753,647 | - | C2H6g08478 | CX6g045945 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| C1H6g25709 | 6:23,762,841-23,767,691 | + | C2H6g14212 | CX6g044060 | LOC_Os06g45350 | Os06g0663900 | - | Detail |
| C1H6g04386 | 6:23,769,542-23,770,027 | + | C2H6g28732 | CX6g045376 | - | - | - | Detail |
| C1H6g08767 | 6:23,771,542-23,779,860 | - | C2H6g24826 | CX6g044758 | LOC_Os06g45360 | Os06g0664100 | - | Detail |
| C1H6g30945 | 6:23,780,623-23,783,096 | - | C2H6g00789 | CX6g042887 | LOC_Os06g45370 | Os06g0664200 | - | Detail |
| C1H6g08586 | 6:23,785,182-23,792,482 | + | C2H6g19748 | CX6g042503 | LOC_Os06g45380 | Os06g0664300 | OsVSR6 | Detail |
| C1H6g03094 | 6:23,793,140-23,796,658 | - | C2H6g01763 | CX6g044595 | LOC_Os06g45390 | Os06g0664400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17767 | 4:16,868,902-16,869,123 | - | - | - | - | - | - | Detail |
| C2H4g27588 | 4:16,874,997-16,878,447 | - | C1H4g17832 | CX4g033505 | LOC_Os04g32950 | Os04g0402100 | - | Detail |
| C2H4g29861 | 4:16,883,499-16,891,971 | - | C1H4g28962 | CX4g033647 | LOC_Os04g32960 | Os04g0402200 | - | Detail |
| C2H4g17148 | 4:16,896,931-16,899,506 | + | C1H4g29248 | CX4g036231 | LOC_Os04g32970 | Os04g0402300 | - | Detail |
| C2H4g06982 | 4:16,903,917-16,904,946 | - | C1H4g15778 | CX4g035592 | LOC_Os04g32980 | Os04g0402500 | - | Detail |
| C2H4g06461 | 4:16,978,397-16,980,226 | + | C1H4g07240 | CX4g036153 | LOC_Os04g33030 | Os04g0403200 | - | Detail |
| C2H4g07757 | 4:16,989,488-16,993,477 | + | C1H4g07835 | CX4g034608 | LOC_Os04g33040 | Os04g0403300 | - | Detail |
| C2H4g27026 | 4:16,993,858-16,998,974 | + | C1H4g10687 | CX4g034506 | LOC_Os04g33050 | Os04g0403400 | - | Detail |
| C2H4g06142 | 4:16,999,493-17,003,341 | + | C1H4g21762 | CX4g033005 | LOC_Os04g33060 | Os04g0403500 | - | Detail |
| C2H4g05650 | 4:17,004,934-17,009,037 | - | C1H4g16707 | CX4g036347 | LOC_Os04g33080 | Os04g0403701 | - | Detail |
| C2H4g08188 | 4:17,033,625-17,034,330 | - | C1H4g29160 | CX4g031400 | LOC_Os04g33110 | Os04g0403900 | - | Detail |
| C2H4g05726 | 4:17,038,269-17,038,834 | - | C1H4g22277 | CX4g033687 | - | - | - | Detail |
| C2H4g02595 | 4:17,055,126-17,056,283 | - | C1H4g01070 | CX4g032114 | LOC_Os04g33150 | Os04g0404400 | TRD4.2 | Detail |
| C2H4g12964 | 4:17,068,439-17,073,756 | + | C1H4g19552 | CX4g035122 | LOC_Os04g33190 | Os04g0404800 | - | Detail |
| C2H4g17158 | 4:17,074,363-17,082,574 | - | C1H4g09341 | CX4g034399 | LOC_Os04g33200 | Os04g0404900 | - | Detail |
| C2H4g18122 | 4:17,087,925-17,093,114 | + | C1H4g00203 | CX4g034889 | LOC_Os04g33210 | Os04g0405000 | - | Detail |
| C2H4g07819 | 4:17,093,907-17,096,569 | - | C1H4g26027 | CX4g033742 | LOC_Os04g33220 | Os04g0405100 | - | Detail |
| C2H4g04199 | 4:17,105,211-17,106,150 | - | C1H4g16846 | CX4g034969 | LOC_Os04g33240 | Os04g0405300 | - | Detail |
| C2H4g22752 | 4:17,116,785-17,117,978 | - | C1H4g08512 | CX4g035634 | LOC_Os04g33260 | Os04g0405500 | - | Detail |
| C2H4g29855 | 4:17,120,942-17,127,086 | - | C1H4g22964 | CX4g036572 | LOC_Os04g33280 | Os04g0405600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |