| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g11972 | 6:23,677,862-23,679,855 | - | C2H6g29043 | CX6g043798 | LOC_Os06g45140 | Os06g0662200 | OsbZIP52, OsbZIP52/RISBZ5, RISBZ5 | Detail |
| C1H6g29265 | 6:23,682,020-23,682,232 | - | - | CX6g045194 | LOC_Os06g45210 | Os06g0662225 | - | Detail |
| C1H6g25624 | 6:23,685,289-23,685,645 | - | - | CX6g045194 | LOC_Os06g45210 | Os06g0662300 | - | Detail |
| C1H6g11744 | 6:23,695,872-23,698,362 | - | - | CX6g045194 | LOC_Os06g45290 | Os06g0662700 | - | Detail |
| C1H6g11913 | 6:23,699,392-23,699,745 | - | - | CX6g045194 | LOC_Os06g45180 | Os06g0662500 | - | Detail |
| C1H6g18698 | 6:23,700,831-23,701,647 | - | C2H3g00405 | CX3g025489 | - | - | - | Detail |
| C1H6g14371 | 6:23,703,041-23,703,394 | - | - | CX6g045194 | LOC_Os06g45210 | Os06g0662850 | - | Detail |
| C1H6g26626 | 6:23,705,205-23,708,764 | - | C2H6g13472 | CX6g045381 | LOC_Os06g45240 | Os06g0663000 | - | Detail |
| C1H6g07836 | 6:23,711,337-23,715,176 | - | C2H6g07889 | CX6g043246 | LOC_Os06g45250 | Os06g0663100 | - | Detail |
| C1H6g25311 | 6:23,715,951-23,721,308 | - | C2H6g25016 | CX6g043895 | LOC_Os06g45280 | Os06g0663200 | - | Detail |
| C1H6g07255 | 6:23,734,145-23,736,547 | + | C2H6g04522 | CX6g044109 | LOC_Os06g45300 | Os06g0663400 | - | Detail |
| C1H6g04964 | 6:23,740,627-23,741,091 | - | C2H6g09171 | CX6g042273 | LOC_Os06g45310 | Os06g0663500 | - | Detail |
| C1H6g11988 | 6:23,747,700-23,751,199 | - | C2H6g13796 | CX6g041502 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| C1H6g24851 | 6:23,752,422-23,753,647 | - | C2H6g08478 | CX6g045945 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| C1H6g25709 | 6:23,762,841-23,767,691 | + | C2H6g14212 | CX6g044060 | LOC_Os06g45350 | Os06g0663900 | - | Detail |
| C1H6g04386 | 6:23,769,542-23,770,027 | + | C2H6g28732 | CX6g045376 | - | - | - | Detail |
| C1H6g08767 | 6:23,771,542-23,779,860 | - | C2H6g24826 | CX6g044758 | LOC_Os06g45360 | Os06g0664100 | - | Detail |
| C1H6g30945 | 6:23,780,623-23,783,096 | - | C2H6g00789 | CX6g042887 | LOC_Os06g45370 | Os06g0664200 | - | Detail |
| C1H6g08586 | 6:23,785,182-23,792,482 | + | C2H6g19748 | CX6g042503 | LOC_Os06g45380 | Os06g0664300 | OsVSR6 | Detail |
| C1H6g03094 | 6:23,793,140-23,796,658 | - | C2H6g01763 | CX6g044595 | LOC_Os06g45390 | Os06g0664400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24728 | 3:31,316,935-31,321,724 | - | C1H3g22167 | CX3g028800 | LOC_Os03g56130 | - | - | Detail |
| C2H3g06440 | 3:31,327,754-31,331,053 | + | C1H3g01200 | CX3g025954 | LOC_Os03g60430 | Os03g0818800 | - | Detail |
| C2H3g15854 | 3:31,340,058-31,344,258 | + | C1H3g02194 | CX3g025292 | LOC_Os03g60460 | Os03g0819100 | - | Detail |
| C2H3g14507 | 3:31,344,895-31,345,709 | + | C1H3g16913 | - | LOC_Os03g60470 | Os03g0819300 | - | Detail |
| C2H3g18275 | 3:31,347,289-31,349,216 | - | C1H3g00081 | CX3g026922 | LOC_Os03g60480 | Os03g0819400 | - | Detail |
| C2H3g02705 | 3:31,353,288-31,354,452 | - | C1H3g02338 | CX3g031046 | LOC_Os03g60509 | Os03g0819600 | - | Detail |
| C2H3g09845 | 3:31,358,386-31,361,160 | - | C1H3g07063 | CX3g025306 | LOC_Os03g60520 | Os03g0819700 | - | Detail |
| C2H3g16290 | 3:31,363,594-31,366,416 | + | C1H3g11685 | CX3g026585 | LOC_Os03g60530 | Os03g0819900 | - | Detail |
| C2H3g01855 | 3:31,369,076-31,375,527 | + | C1H3g13391 | CX3g025197 | LOC_Os03g60550 | Os03g0820100 | - | Detail |
| C2H3g30643 | 3:31,383,244-31,386,657 | + | C1H3g31889 | CX3g030735 | LOC_Os03g60580 | Os03g0820500 | OsADF3 | Detail |
| C2H3g14030 | 3:31,387,363-31,389,861 | + | C1H3g18878 | CX3g026527 | LOC_Os03g60580 | Os03g0820600 | - | Detail |
| C2H3g06884 | 3:31,390,753-31,394,065 | - | C1H3g26924 | CX3g029295 | LOC_Os03g60600 | Os03g0820700 | - | Detail |
| C2H3g20559 | 3:31,396,075-31,401,135 | - | C1H3g11416 | CX3g025531 | LOC_Os03g60610 | Os03g0820900 | - | Detail |
| C2H3g05607 | 3:31,403,570-31,408,330 | + | C1H3g28279 | CX3g027512 | LOC_Os03g60620 | Os03g0821100 | - | Detail |
| C2H3g25786 | 3:31,412,729-31,414,281 | + | C1H3g25995 | CX3g030377 | LOC_Os03g60630 | Os03g0821200 | - | Detail |
| C2H3g20031 | 3:31,428,765-31,429,098 | - | C1H3g30691 | CX3g029500 | - | - | - | Detail |
| C2H3g23674 | 3:31,430,739-31,434,322 | - | C1H3g24438 | CX3g027662 | LOC_Os03g60650 | Os03g0821300 | - | Detail |
| C2H3g24002 | 3:31,449,417-31,450,208 | + | - | CX3g031271 | LOC_Os03g60660 | Os03g0821550 | - | Detail |
| C2H3g16181 | 3:31,453,728-31,454,367 | - | - | CX3g026233 | - | - | - | Detail |
| C2H3g23136 | 3:31,455,272-31,458,425 | - | C1H3g12541 | CX3g026762 | LOC_Os03g60700 | Os03g0821800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |