| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g11972 | 6:23,677,862-23,679,855 | - | C2H6g29043 | CX6g043798 | LOC_Os06g45140 | Os06g0662200 | OsbZIP52, OsbZIP52/RISBZ5, RISBZ5 | Detail |
| C1H6g29265 | 6:23,682,020-23,682,232 | - | - | CX6g045194 | LOC_Os06g45210 | Os06g0662225 | - | Detail |
| C1H6g25624 | 6:23,685,289-23,685,645 | - | - | CX6g045194 | LOC_Os06g45210 | Os06g0662300 | - | Detail |
| C1H6g11744 | 6:23,695,872-23,698,362 | - | - | CX6g045194 | LOC_Os06g45290 | Os06g0662700 | - | Detail |
| C1H6g11913 | 6:23,699,392-23,699,745 | - | - | CX6g045194 | LOC_Os06g45180 | Os06g0662500 | - | Detail |
| C1H6g18698 | 6:23,700,831-23,701,647 | - | C2H3g00405 | CX3g025489 | - | - | - | Detail |
| C1H6g14371 | 6:23,703,041-23,703,394 | - | - | CX6g045194 | LOC_Os06g45210 | Os06g0662850 | - | Detail |
| C1H6g26626 | 6:23,705,205-23,708,764 | - | C2H6g13472 | CX6g045381 | LOC_Os06g45240 | Os06g0663000 | - | Detail |
| C1H6g07836 | 6:23,711,337-23,715,176 | - | C2H6g07889 | CX6g043246 | LOC_Os06g45250 | Os06g0663100 | - | Detail |
| C1H6g25311 | 6:23,715,951-23,721,308 | - | C2H6g25016 | CX6g043895 | LOC_Os06g45280 | Os06g0663200 | - | Detail |
| C1H6g07255 | 6:23,734,145-23,736,547 | + | C2H6g04522 | CX6g044109 | LOC_Os06g45300 | Os06g0663400 | - | Detail |
| C1H6g04964 | 6:23,740,627-23,741,091 | - | C2H6g09171 | CX6g042273 | LOC_Os06g45310 | Os06g0663500 | - | Detail |
| C1H6g11988 | 6:23,747,700-23,751,199 | - | C2H6g13796 | CX6g041502 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| C1H6g24851 | 6:23,752,422-23,753,647 | - | C2H6g08478 | CX6g045945 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| C1H6g25709 | 6:23,762,841-23,767,691 | + | C2H6g14212 | CX6g044060 | LOC_Os06g45350 | Os06g0663900 | - | Detail |
| C1H6g04386 | 6:23,769,542-23,770,027 | + | C2H6g28732 | CX6g045376 | - | - | - | Detail |
| C1H6g08767 | 6:23,771,542-23,779,860 | - | C2H6g24826 | CX6g044758 | LOC_Os06g45360 | Os06g0664100 | - | Detail |
| C1H6g30945 | 6:23,780,623-23,783,096 | - | C2H6g00789 | CX6g042887 | LOC_Os06g45370 | Os06g0664200 | - | Detail |
| C1H6g08586 | 6:23,785,182-23,792,482 | + | C2H6g19748 | CX6g042503 | LOC_Os06g45380 | Os06g0664300 | OsVSR6 | Detail |
| C1H6g03094 | 6:23,793,140-23,796,658 | - | C2H6g01763 | CX6g044595 | LOC_Os06g45390 | Os06g0664400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16083 | 3:3,926,979-3,928,761 | - | C1H3g01138 | CX3g028992 | LOC_Os03g08800 | Os03g0186950 | - | Detail |
| C2H3g01321 | 3:3,929,010-3,931,402 | + | C1H3g25676 | CX3g028590 | LOC_Os03g08810 | Os03g0187000 | - | Detail |
| C2H3g18803 | 3:3,935,124-3,944,277 | + | C1H3g24115 | CX3g028907 | LOC_Os03g08820 | Os03g0187100 | - | Detail |
| C2H3g23594 | 3:3,945,461-3,953,875 | + | C1H3g08043 | CX3g027040 | LOC_Os03g08830 | Os03g0187300 | - | Detail |
| C2H3g16918 | 3:3,954,139-3,954,676 | - | C1H3g17315 | - | LOC_Os03g08834 | Os03g0187350 | - | Detail |
| C2H3g02517 | 3:3,958,383-3,960,827 | + | C1H3g31610 | CX3g027060 | LOC_Os03g08840 | Os03g0187400 | - | Detail |
| C2H3g15703 | 3:3,969,441-3,972,235 | - | C1H3g08919 | CX3g030287 | LOC_Os03g08850 | Os03g0187500 | - | Detail |
| C2H3g10684 | 3:3,977,594-3,979,564 | + | C1H3g13450 | CX3g026706 | LOC_Os03g08860 | Os03g0187600 | OsGRAM | Detail |
| C2H3g13978 | 3:3,981,806-3,983,614 | + | C1H3g23881 | CX3g030725 | LOC_Os03g08870 | Os03g0187700 | - | Detail |
| C2H3g19491 | 3:3,984,788-3,985,984 | - | C1H3g03880 | CX3g025062 | LOC_Os03g08880 | Os03g0187800 | OsPUP1 | Detail |
| C2H3g07130 | 3:3,999,076-4,004,695 | + | C1H3g16094 | CX3g031032 | LOC_Os03g08900 | Os03g0188100 | OsMATE1 | Detail |
| C2H3g06873 | 3:4,005,682-4,006,743 | - | C1H3g05331 | CX3g024958 | LOC_Os03g08920 | Os03g0188200 | - | Detail |
| C2H3g17114 | 3:4,018,397-4,019,985 | + | C1H3g20727 | CX3g029018 | LOC_Os03g08930 | Os03g0188400 | OsbHLH96 | Detail |
| C2H3g22297 | 3:4,025,116-4,025,502 | - | C1H3g00664 | CX3g027139 | - | Os03g0188500 | - | Detail |
| C2H3g19207 | 3:4,042,192-4,043,417 | + | C1H3g17061 | CX3g028802 | LOC_Os03g08960 | Os03g0188900 | - | Detail |
| C2H3g07421 | 3:4,050,255-4,050,785 | + | C1H3g18298 | CX3g026805 | LOC_Os03g08970 | Os03g0189100 | - | Detail |
| C2H3g08533 | 3:4,054,775-4,056,100 | - | C1H3g19818 | CX3g027676 | LOC_Os03g08980 | Os03g0189300 | - | Detail |
| C2H3g28618 | 3:4,056,771-4,057,468 | - | C1H3g18359 | CX3g030934 | LOC_Os03g08999 | Os03g0189400 | - | Detail |
| C2H3g11626 | 3:4,057,480-4,058,384 | - | C1H3g16437 | CX3g030934 | LOC_Os03g08999 | Os03g0189400 | - | Detail |
| C2H3g03286 | 3:4,062,516-4,062,730 | - | C1H3g29808 | CX3g030934 | LOC_Os03g09020 | Os03g0189400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |