| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g20333 | 6:23,554,310-23,555,618 | + | C2H6g19745 | CX6g045501 | LOC_Os06g44900 | Os06g0659400 | - | Detail |
| C1H6g30421 | 6:23,556,586-23,558,799 | + | C2H6g17624 | CX6g042165 | LOC_Os06g44910 | Os06g0659500 | - | Detail |
| C1H6g23103 | 6:23,564,657-23,564,998 | - | - | - | - | - | - | Detail |
| C1H6g05245 | 6:23,565,032-23,566,135 | - | - | - | - | Os06g0659600 | - | Detail |
| C1H6g28818 | 6:23,572,502-23,572,972 | - | - | CX6g043921 | LOC_Os06g44930 | Os06g0659800 | - | Detail |
| C1H6g30289 | 6:23,593,802-23,597,273 | + | C2H6g29145 | CX6g043417 | LOC_Os06g44970 | Os06g0660200 | OsPIN2, PIN2 | Detail |
| C1H6g03713 | 6:23,602,801-23,603,007 | - | - | CX6g042752 | LOC_Os06g44980 | Os06g0660400 | - | Detail |
| C1H6g10775 | 6:23,606,289-23,610,695 | + | C2H6g26561 | CX6g042267 | LOC_Os06g45000 | Os06g0660700 | - | Detail |
| C1H6g30897 | 6:23,613,912-23,620,492 | + | C2H6g03279 | CX6g042767 | LOC_Os06g45020 | Os06g0660800 | - | Detail |
| C1H6g23868 | 6:23,627,158-23,627,886 | + | C2H6g19072 | CX6g043493 | LOC_Os06g45040 | Os06g0661200 | - | Detail |
| C1H6g04237 | 6:23,631,297-23,632,266 | - | C2H6g19984 | CX6g043377 | - | - | - | Detail |
| C1H6g05211 | 6:23,633,734-23,633,961 | - | - | CX6g042698 | - | - | - | Detail |
| C1H6g27462 | 6:23,634,101-23,637,719 | + | C2H6g15814 | CX6g044438 | LOC_Os06g45050 | Os06g0661400 | - | Detail |
| C1H6g20860 | 6:23,638,176-23,639,127 | - | C2H6g03533 | CX6g043401 | LOC_Os06g45060 | Os06g0661500 | - | Detail |
| C1H6g12888 | 6:23,639,514-23,639,759 | + | - | CX6g042755 | LOC_Os06g45070 | Os06g0661600 | - | Detail |
| C1H6g10184 | 6:23,641,750-23,646,183 | - | C2H6g07549 | CX6g042847 | LOC_Os06g45080 | Os06g0661700 | - | Detail |
| C1H6g11026 | 6:23,649,729-23,650,645 | + | C2H6g01023 | CX6g044489 | LOC_Os06g45090 | Os06g0661766 | - | Detail |
| C1H6g25522 | 6:23,651,373-23,654,571 | - | C2H6g03075 | CX6g042632 | LOC_Os06g45100 | Os06g0661800 | - | Detail |
| C1H6g23408 | 6:23,655,485-23,660,585 | - | C2H6g29640 | CX6g045877 | LOC_Os06g45110 | Os06g0661900 | - | Detail |
| C1H6g23397 | 6:23,661,871-23,668,485 | - | C2H6g27870 | CX6g045100 | LOC_Os06g45120 | Os06g0662000 | PLS1, OsVHA-A, VHAA1, VHA-A1, OsPLS1, OsPLS1/VHA-A1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21930 | 3:32,150,556-32,154,996 | + | C1H3g04060 | CX3g029514 | LOC_Os03g62200 | Os03g0838400 | - | Detail |
| C2H3g30547 | 3:32,154,179-32,155,651 | - | C1H3g30110 | - | - | - | - | Detail |
| C2H3g29109 | 3:32,155,144-32,155,530 | + | C1H3g03475 | CX3g029120 | LOC_Os03g62210 | Os03g0838500 | - | Detail |
| C2H3g14459 | 3:32,163,817-32,165,237 | - | C1H3g08024 | CX3g028242 | LOC_Os03g62240 | Os03g0838900 | - | Detail |
| C2H3g18580 | 3:32,166,727-32,169,276 | - | C1H3g14166 | CX3g026663 | LOC_Os03g62250 | Os03g0839000 | - | Detail |
| C2H3g04219 | 3:32,170,446-32,174,439 | - | C1H3g19313 | CX3g026956 | LOC_Os03g62260 | Os03g0839100 | - | Detail |
| C2H3g25899 | 3:32,181,533-32,185,188 | + | C1H3g09907 | CX3g025647 | LOC_Os03g62270 | Os03g0839200 | SMG4 | Detail |
| C2H3g29754 | 3:32,199,447-32,199,857 | - | C1H3g11170 | CX3g026655 | LOC_Os03g62330 | Os03g0839800 | - | Detail |
| C2H3g16491 | 3:32,205,796-32,210,390 | - | C1H3g19828 | CX3g027925 | LOC_Os03g62340 | Os03g0839900 | - | Detail |
| C2H3g23134 | 3:32,225,617-32,234,890 | - | C1H3g10496 | CX3g027463 | LOC_Os03g62388 | Os03g0840500 | - | Detail |
| C2H3g17763 | 3:32,236,269-32,239,656 | - | C1H3g17885 | CX3g031342 | LOC_Os03g62400 | Os03g0627100 | - | Detail |
| C2H3g05770 | 3:32,240,626-32,245,153 | - | C1H3g03752 | CX3g030069 | LOC_Os03g62410 | Os03g0840800 | - | Detail |
| C2H3g27419 | 3:32,246,352-32,249,035 | - | C1H3g30697 | CX3g028979 | LOC_Os03g62420 | Os03g0840900 | DVB1 | Detail |
| C2H3g06584 | 3:32,250,917-32,255,271 | - | C1H3g04157 | CX3g025236 | LOC_Os03g62430 | Os03g0841100 | - | Detail |
| C2H3g20263 | 3:32,261,597-32,263,501 | - | C1H3g25165 | CX3g025448 | LOC_Os03g62490 | Os03g0841700 | - | Detail |
| C2H3g22865 | 3:32,264,375-32,270,473 | - | C1H3g04020 | CX3g031204 | LOC_Os03g62500 | Os03g0841800 | - | Detail |
| C2H3g23885 | 3:32,271,472-32,276,749 | - | C1H3g13920 | CX3g029829 | LOC_Os03g62510 | Os03g0841900 | - | Detail |
| C2H3g18445 | 3:32,292,035-32,295,016 | + | C1H3g00003 | CX3g029998 | LOC_Os03g62580 | Os03g0842700 | - | Detail |
| C2H3g22112 | 3:32,296,303-32,298,057 | - | C1H3g05358 | CX3g025495 | LOC_Os03g62590 | Os03g0842900 | OsHSD2 | Detail |
| C2H3g14550 | 3:32,300,122-32,301,481 | - | C1H3g18020 | CX3g028475 | LOC_Os03g62600 | Os03g0843100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |