| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g03363 | 6:20,741,190-20,743,961 | + | C2H6g28120 | CX6g042659 | LOC_Os06g39960 | Os06g0601500 | OsbZIP48, OsHY5L2 | Detail |
| C1H6g30468 | 6:20,745,286-20,748,544 | + | C2H6g17237 | CX6g042583 | LOC_Os06g39970 | Os06g0601600 | OsCESA11 | Detail |
| C1H6g18591 | 6:20,756,432-20,761,437 | + | C2H6g29039 | CX6g044674 | LOC_Os06g40020 | Os06g0602400 | OsRH52A | Detail |
| C1H6g13553 | 6:20,764,015-20,766,456 | - | C2H6g00455 | CX6g043985 | LOC_Os06g40030 | Os06g0602500 | SDRLK-38 | Detail |
| C1H6g01432 | 6:20,776,350-20,777,897 | + | C2H6g11572 | CX6g045252 | LOC_Os06g40040 | Os06g0602600 | - | Detail |
| C1H6g22569 | 6:20,778,453-20,782,098 | - | C2H6g05068 | CX6g041818 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| C1H6g14736 | 6:20,798,183-20,802,258 | + | C2H6g14435 | CX6g042177 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| C1H6g19546 | 6:20,802,902-20,806,213 | - | C2H6g04094 | CX6g041181 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| C1H6g00043 | 6:20,808,705-20,812,222 | - | C2H6g04563 | CX6g043114 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| C1H6g15267 | 6:20,818,334-20,818,963 | - | - | CX6g043884 | LOC_Os06g40090 | Os06g0603300 | - | Detail |
| C1H6g03115 | 6:20,828,888-20,829,673 | - | - | CX6g044727 | LOC_Os06g40110 | Os06g0603400 | - | Detail |
| C1H6g11187 | 6:20,830,778-20,834,820 | - | C2H6g18680 | CX6g043946 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| C1H6g05477 | 6:20,851,144-20,852,115 | - | C2H6g21981 | CX6g044688 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| C1H6g20423 | 6:20,860,290-20,863,424 | - | C2H6g11228 | CX6g045934 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| C1H6g10180 | 6:20,873,907-20,876,878 | + | C2H6g26456 | CX6g045594 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| C1H6g30929 | 6:20,879,496-20,883,093 | - | C2H1g07562 | - | - | Os07g0248900 | - | Detail |
| C1H6g27795 | 6:20,886,285-20,889,959 | + | C2H6g06437 | CX6g041305 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| C1H6g25357 | 6:20,893,132-20,897,107 | + | C2H6g13702 | CX6g042132 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| C1H6g04884 | 6:20,907,660-20,908,195 | + | C2H6g02651 | CX6g044895 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| C1H6g20614 | 6:20,916,125-20,917,469 | - | C2H6g13160 | CX6g045437 | LOC_Os06g40220 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09563 | 1:25,515,887-25,517,528 | + | C1H1g29386 | CX1g001085 | LOC_Os01g49820 | Os01g0693300 | - | Detail |
| C2H1g14365 | 1:25,574,489-25,576,712 | - | C1H1g28615 | CX1g006741 | LOC_Os01g49900 | Os01g0693900 | - | Detail |
| C2H1g09264 | 1:25,581,027-25,584,323 | + | C1H1g20356 | CX1g002422 | LOC_Os01g49910 | Os01g0694000 | - | Detail |
| C2H1g01798 | 1:25,585,503-25,588,955 | + | C1H1g10906 | CX1g005199 | LOC_Os01g49920 | Os01g0694100 | - | Detail |
| C2H1g29437 | 1:25,590,982-25,595,590 | - | C1H1g14019 | CX1g005889 | LOC_Os01g49930 | Os01g0694200 | - | Detail |
| C2H1g02878 | 1:25,599,395-25,614,726 | - | C1H1g11575 | CX1g000910 | LOC_Os01g49940 | Os01g0694300 | - | Detail |
| C2H1g12436 | 1:25,623,513-25,629,371 | + | C1H1g23983 | CX1g003379 | LOC_Os01g50010 | Os01g0694900 | - | Detail |
| C2H1g09448 | 1:25,630,444-25,635,380 | + | C1H1g09854 | CX1g006314 | LOC_Os01g50032 | Os01g0695100 | OsPEAMT1 | Detail |
| C2H1g20938 | 1:25,637,468-25,641,622 | + | C1H1g24840 | CX1g000495 | LOC_Os01g50040 | Os01g0695200 | - | Detail |
| C2H1g12268 | 1:25,642,374-25,645,425 | - | C1H1g15839 | CX1g005052 | LOC_Os01g50050 | Os01g0695300 | OsFPS3 | Detail |
| C2H1g10720 | 1:25,646,281-25,648,972 | - | C1H1g09427 | CX1g001238 | LOC_Os01g50060 | Os01g0695600 | - | Detail |
| C2H1g19234 | 1:25,660,021-25,671,265 | + | C1H1g28535 | CX1g000682 | LOC_Os01g50080 | Os01g0290700 | - | Detail |
| C2H1g29650 | 1:25,671,761-25,672,246 | + | C1H1g24452 | CX1g004640 | - | - | - | Detail |
| C2H1g26297 | 1:25,673,106-25,679,579 | - | C1H1g20551 | CX1g004821 | LOC_Os01g50100 | Os01g0695800 | - | Detail |
| C2H1g18904 | 1:25,689,624-25,690,797 | + | C1H1g28063 | CX1g003608 | LOC_Os01g50110 | Os01g0695900 | Os2R_MYB11 | Detail |
| C2H1g25152 | 1:25,692,266-25,693,954 | + | C1H1g21196 | CX1g004393 | LOC_Os01g50120 | Os01g0696000 | - | Detail |
| C2H1g29550 | 1:25,694,361-25,695,957 | - | C1H1g00928 | CX1g001262 | - | Os01g0696100 | - | Detail |
| C2H1g29725 | 1:25,709,468-25,716,463 | + | C1H1g28913 | CX1g003854 | LOC_Os01g50160 | Os01g0290700 | - | Detail |
| C2H1g21453 | 1:25,738,425-25,739,296 | - | C1H1g01002 | CX1g006665 | LOC_Os01g50259 | Os01g0697700 | - | Detail |
| C2H1g03629 | 1:25,740,336-25,740,851 | - | C1H1g31100 | CX1g006665 | LOC_Os01g50259 | Os01g0697400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |