| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g24875 | 6:19,744,434-19,746,508 | + | - | - | - | - | - | Detail |
| C1H6g18173 | 6:19,766,427-19,766,648 | - | - | - | LOC_Os06g37980 | - | - | Detail |
| C1H6g11565 | 6:19,785,269-19,788,516 | + | - | - | LOC_Os06g38080 | Os06g0578700 | - | Detail |
| C1H6g03435 | 6:19,902,530-19,903,000 | + | C2H6g22188 | CX6g042586 | LOC_Os06g38210 | Os06g0580100 | - | Detail |
| C1H6g07871 | 6:19,912,970-19,922,008 | - | C2H6g22657 | CX6g043082 | LOC_Os06g38294 | Os06g0581000 | - | Detail |
| C1H6g04743 | 6:19,921,567-19,922,109 | + | C2H6g07799 | - | - | - | - | Detail |
| C1H6g06519 | 6:19,959,516-19,964,963 | + | C2H6g07253 | CX6g045241 | LOC_Os06g38320 | Os06g0581300 | - | Detail |
| C1H6g22042 | 6:19,971,537-19,975,372 | - | C2H6g01157 | CX6g045318 | LOC_Os06g38340 | Os06g0581500 | - | Detail |
| C1H6g03948 | 6:19,985,220-19,985,568 | + | - | - | LOC_Os06g38350 | Os06g0581701 | - | Detail |
| C1H6g02302 | 6:20,024,731-20,025,413 | + | - | - | - | - | - | Detail |
| C1H6g12780 | 6:20,039,841-20,041,173 | + | - | - | LOC_Os06g38450 | Os06g0582600 | - | Detail |
| C1H6g16720 | 6:20,047,329-20,053,204 | - | C2H6g10786 | CX6g044441 | LOC_Os06g38470 | Os06g0583400 | - | Detail |
| C1H6g12712 | 6:20,057,328-20,061,135 | + | C2H6g01563 | CX6g044919 | LOC_Os06g38490 | Os06g0583600 | - | Detail |
| C1H6g30130 | 6:20,064,887-20,066,459 | + | C2H6g21399 | CX6g043548 | LOC_Os06g38510 | Os06g0583900 | OsPLL9 | Detail |
| C1H6g08642 | 6:20,067,021-20,068,893 | + | C2H6g16791 | CX6g043548 | LOC_Os06g38510 | Os06g0583900 | OsPLL9 | Detail |
| C1H6g16486 | 6:20,068,932-20,069,141 | + | C2H6g08203 | CX6g043548 | LOC_Os06g38510 | Os06g0583900 | OsPLL9 | Detail |
| C1H6g20296 | 6:20,069,152-20,069,484 | + | C2H6g21399 | CX6g043548 | LOC_Os06g38510 | Os06g0583900 | OsPLL9 | Detail |
| C1H6g08617 | 6:20,080,465-20,080,989 | + | C2H6g21399 | CX6g043548 | LOC_Os06g38510 | Os06g0583900 | OsPLL9 | Detail |
| C1H6g10926 | 6:20,088,449-20,090,467 | + | C2H6g22333 | CX6g045723 | LOC_Os06g38550 | Os06g0584200 | - | Detail |
| C1H6g06948 | 6:20,110,936-20,114,438 | + | C2H6g09505 | CX6g042489 | LOC_Os06g38640 | Os06g0585982 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24146 | 3:902,277-905,502 | + | C1H3g21463 | - | LOC_Os03g02820 | Os03g0120000 | - | Detail |
| C2H3g12012 | 3:905,885-908,766 | - | C1H3g16632 | CX3g031103 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| C2H3g14284 | 3:910,317-914,198 | - | C1H3g08934 | CX3g026078 | LOC_Os03g02840 | Os03g0120200 | - | Detail |
| C2H3g02407 | 3:923,819-927,470 | - | C1H3g03441 | CX3g026290 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| C2H3g11600 | 3:929,349-930,854 | - | C1H3g10934 | CX3g025360 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| C2H3g16408 | 3:944,013-947,894 | + | C1H3g08539 | CX3g028149 | LOC_Os03g02890 | Os03g0120800 | - | Detail |
| C2H3g18948 | 3:960,186-961,118 | + | C1H3g19352 | CX3g029289 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| C2H3g18738 | 3:978,379-982,304 | - | C1H3g28264 | CX3g025034 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| C2H3g23557 | 3:984,957-986,513 | - | C1H3g20047 | CX3g026688 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| C2H3g04065 | 3:993,230-994,504 | + | C1H3g01141 | CX3g025202 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| C2H3g16968 | 3:994,604-1,003,811 | - | C1H3g02111 | CX3g027774 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| C2H3g23905 | 3:1,015,206-1,021,163 | + | C1H3g23785 | CX3g028931 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| C2H3g27024 | 3:1,028,901-1,029,277 | + | C1H3g05090 | - | - | - | - | Detail |
| C2H3g24994 | 3:1,029,464-1,032,408 | + | C1H3g07706 | CX3g026004 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| C2H3g11967 | 3:1,035,229-1,037,122 | - | C1H3g24387 | CX3g025069 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| C2H3g05774 | 3:1,038,204-1,043,973 | - | C1H3g05611 | CX3g031243 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| C2H3g15040 | 3:1,057,763-1,062,339 | - | C1H3g26838 | CX3g027036 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| C2H3g28462 | 3:1,082,037-1,083,831 | - | C1H3g04456 | CX3g025481 | LOC_Os03g03100 | Os03g0834466 | - | Detail |
| C2H3g16267 | 3:1,095,728-1,096,384 | + | C1H3g18665 | CX3g031045 | - | - | - | Detail |
| C2H3g19854 | 3:1,097,016-1,100,081 | + | C1H3g16789 | CX3g030103 | LOC_Os03g03130 | Os03g0123100 | OsSCE2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |