| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g12044 | 6:19,045,510-19,053,411 | - | C2H6g21792 | CX6g044061 | - | - | - | Detail |
| C1H6g20579 | 6:19,172,765-19,175,505 | - | C2H6g29498 | CX6g042849 | LOC_Os06g36820 | Os06g0564700 | - | Detail |
| C1H6g25657 | 6:19,177,423-19,181,981 | - | C2H6g19648 | CX6g041590 | LOC_Os06g36890 | Os06g0564800 | - | Detail |
| C1H6g19779 | 6:19,186,435-19,188,498 | + | C2H6g11712 | CX6g042099 | LOC_Os06g36910 | Os06g0565000 | - | Detail |
| C1H6g21436 | 6:19,191,698-19,194,659 | - | C2H6g16057 | CX6g045195 | LOC_Os06g36920 | Os06g0565100 | Os5100, CYP711A6 | Detail |
| C1H6g20132 | 6:19,196,022-19,197,122 | + | C2H6g28646 | CX6g044852 | LOC_Os06g36930 | Os06g0565200 | - | Detail |
| C1H6g20943 | 6:19,198,118-19,199,730 | - | C2H6g27698 | CX6g042845 | LOC_Os06g36940 | Os06g0565300 | - | Detail |
| C1H6g07047 | 6:19,215,705-19,222,396 | + | C2H6g14787 | CX6g045488 | LOC_Os06g36990 | Os06g0565900 | - | Detail |
| C1H6g11547 | 6:19,225,549-19,228,331 | + | C2H6g12222 | CX6g044842 | LOC_Os06g37000 | Os06g0566100 | - | Detail |
| C1H6g06781 | 6:19,229,532-19,230,116 | + | C2H6g12222 | CX6g044842 | LOC_Os06g37000 | Os06g0566100 | - | Detail |
| C1H6g20512 | 6:19,232,094-19,234,544 | + | C2H6g05740 | CX6g045261 | LOC_Os06g37010 | Os06g0566300 | - | Detail |
| C1H6g02610 | 6:19,232,673-19,233,417 | - | - | - | - | Os06g0566201 | - | Detail |
| C1H6g09779 | 6:19,255,140-19,256,054 | + | - | CX6g045313 | LOC_Os06g37020 | Os06g0566500 | - | Detail |
| C1H6g02032 | 6:19,271,789-19,273,095 | - | C2H6g25496 | CX6g045076 | LOC_Os06g37080 | Os06g0567200 | OsAAO1 | Detail |
| C1H6g21176 | 6:19,276,342-19,280,105 | + | C2H6g10335 | - | - | Os06g0566700 | - | Detail |
| C1H6g28021 | 6:19,279,551-19,279,757 | - | - | CX6g044213 | - | Os06g0566850 | - | Detail |
| C1H6g17693 | 6:19,283,409-19,285,296 | + | C2H6g11534 | CX6g041847 | LOC_Os06g37070 | Os06g0567000 | - | Detail |
| C1H6g27275 | 6:19,292,118-19,297,166 | + | C2H6g19087 | CX6g041814 | LOC_Os06g37080 | Os06g0567200 | OsAAO1 | Detail |
| C1H6g21542 | 6:19,316,221-19,320,157 | + | C2H6g01618 | CX6g044886 | LOC_Os06g37150 | Os06g0567900 | AO, OsAAO2 | Detail |
| C1H6g28567 | 6:19,320,320-19,324,762 | - | C2H6g02242 | CX6g042535 | LOC_Os06g37160 | Os06g0568000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03998 | 1:2,164,077-2,165,131 | - | C1H1g29078 | CX1g003888 | LOC_Os01g05370 | Os01g0144800 | - | Detail |
| C2H1g05408 | 1:2,174,818-2,178,246 | + | C1H1g29078 | CX1g003888 | LOC_Os01g05410 | Os01g0147001 | - | Detail |
| C2H1g08018 | 1:2,185,334-2,189,822 | + | C1H1g18605 | CX1g000323 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| C2H1g25573 | 1:2,191,220-2,194,402 | + | C1H1g08705 | CX1g001325 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| C2H1g12465 | 1:2,194,554-2,196,403 | - | C1H1g07217 | CX1g003030 | LOC_Os01g05440 | Os01g0147400 | - | Detail |
| C2H1g27793 | 1:2,197,356-2,199,409 | - | C1H1g03816 | - | LOC_Os01g05450 | Os01g0147600 | - | Detail |
| C2H1g00931 | 1:2,200,826-2,203,456 | - | C1H1g25686 | - | LOC_Os01g05460 | Os01g0147600 | - | Detail |
| C2H1g02244 | 1:2,205,153-2,207,498 | - | C1H1g30607 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C2H1g25353 | 1:2,210,513-2,219,278 | - | C1H1g11928 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C2H1g29480 | 1:2,221,494-2,225,565 | - | C1H1g17304 | CX1g005120 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| C2H1g30066 | 1:2,226,864-2,230,987 | - | C1H1g08404 | CX1g006525 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| C2H1g25150 | 1:2,236,272-2,249,202 | + | C1H1g03903 | CX1g001423 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| C2H1g10498 | 1:2,256,405-2,259,371 | - | C1H1g24472 | CX1g005368 | LOC_Os01g05620 | Os01g0149500 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59 | Detail |
| C2H1g18971 | 1:2,261,730-2,262,191 | + | C1H1g09766 | CX1g005739 | LOC_Os01g05630 | Os01g0149600 | H2B | Detail |
| C2H1g06791 | 1:2,263,340-2,266,739 | - | C1H1g22469 | CX1g006643 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| C2H1g28846 | 1:2,268,550-2,269,982 | - | C1H1g18521 | - | LOC_Os01g05650 | Os01g0149800 | - | Detail |
| C2H1g25044 | 1:2,274,627-2,278,471 | - | C1H1g17924 | CX1g006502 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| C2H1g00511 | 1:2,283,854-2,287,505 | - | C1H1g30008 | CX1g002286 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| C2H1g17834 | 1:2,289,627-2,293,258 | + | C1H1g15806 | CX1g000079 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| C2H1g21300 | 1:2,294,207-2,296,973 | + | C1H1g24721 | CX4g035052 | LOC_Os01g05694 | Os01g0150200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |