| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g30409 | 6:18,342,460-18,351,804 | + | C2H6g09581 | CX6g044312 | LOC_Os06g36080 | Os06g0554700 | - | Detail |
| C1H6g12887 | 6:18,352,318-18,365,457 | - | C2H6g20811 | CX6g044731 | LOC_Os06g36090 | Os06g0554800 | - | Detail |
| C1H6g18940 | 6:18,379,612-18,383,047 | + | C2H6g19558 | CX6g045470 | LOC_Os06g36160 | Os06g0555400 | - | Detail |
| C1H6g27356 | 6:18,383,853-18,387,163 | - | C2H6g01553 | CX6g041699 | LOC_Os06g36170 | Os06g0555500 | - | Detail |
| C1H6g25734 | 6:18,396,642-18,399,434 | - | C2H6g08197 | CX6g045859 | LOC_Os04g55280 | Os04g0646000 | - | Detail |
| C1H6g05986 | 6:18,400,477-18,401,920 | - | C2H6g02285 | CX6g041977 | LOC_Os01g63890 | Os04g0646100 | - | Detail |
| C1H6g09123 | 6:18,421,362-18,430,205 | + | C2H6g03125 | CX6g044183 | LOC_Os06g36180 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g31088 | 6:18,451,454-18,455,209 | + | C2H6g24860 | CX6g044183 | LOC_Os06g36210 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g04383 | 6:18,455,547-18,456,599 | + | C2H6g20565 | CX6g042707 | LOC_Os06g36210 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g20721 | 6:18,459,013-18,463,635 | - | C2H6g04951 | CX6g043932 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| C1H6g19530 | 6:18,464,830-18,470,493 | - | C2H6g00925 | CX6g043875 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| C1H6g25463 | 6:18,477,053-18,477,663 | + | C2H6g03428 | CX6g045462 | LOC_Os06g36240 | Os06g0556600 | - | Detail |
| C1H6g05440 | 6:18,500,814-18,502,005 | - | C2H6g00804 | - | - | - | - | Detail |
| C1H6g14762 | 6:18,521,513-18,526,151 | + | C2H6g20088 | CX6g045760 | LOC_Os06g36270 | Os06g0557100 | - | Detail |
| C1H6g25128 | 6:18,567,862-18,568,770 | + | C2H6g28947 | CX6g045760 | LOC_Os06g36320 | Os06g0557700 | - | Detail |
| C1H6g06230 | 6:18,575,227-18,575,826 | + | C2H6g11791 | CX6g042210 | LOC_Os06g36320 | Os06g0557700 | - | Detail |
| C1H6g05685 | 6:18,630,560-18,637,243 | - | C2H6g27740 | CX6g043607 | LOC_Os06g36360 | Os06g0558766 | - | Detail |
| C1H6g20753 | 6:18,660,671-18,661,952 | + | C2H6g07116 | CX6g041768 | LOC_Os06g36390 | Os06g0559400 | - | Detail |
| C1H6g11485 | 6:18,662,491-18,665,569 | - | C2H6g12142 | CX6g043353 | LOC_Os06g36400 | Os06g0559500 | - | Detail |
| C1H6g21786 | 6:18,671,291-18,673,620 | - | C2H6g13654 | CX6g043474 | LOC_Os06g36450 | Os06g0560000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g17017 | 3:8,283,824-8,287,673 | + | C1H3g16199 | CX3g030195 | LOC_Os03g17030 | Os03g0278500 | - | Detail |
| C2H3g11032 | 3:8,296,920-8,298,774 | - | - | CX3g026075 | - | Os03g0278566 | - | Detail |
| C2H3g02257 | 3:8,299,374-8,308,120 | + | C1H3g31491 | CX3g025742 | LOC_Os03g17050 | Os03g0278700 | - | Detail |
| C2H3g24586 | 3:8,309,169-8,310,421 | - | C1H3g01943 | CX3g027653 | LOC_Os03g17060 | Os03g0278800 | - | Detail |
| C2H3g27921 | 3:8,311,367-8,312,005 | - | C1H3g21484 | CX3g028557 | LOC_Os03g17070 | Os03g0278900 | - | Detail |
| C2H3g12181 | 3:8,312,436-8,315,726 | + | C1H3g21261 | CX3g025758 | LOC_Os03g17060 | Os03g0278800 | - | Detail |
| C2H3g30418 | 3:8,317,586-8,318,172 | - | C1H3g00735 | CX3g029719 | LOC_Os03g17100 | Os03g0279200 | - | Detail |
| C2H3g16393 | 3:8,321,716-8,326,057 | - | C1H3g01283 | CX3g031018 | LOC_Os03g17120 | Os03g0279400 | - | Detail |
| C2H3g21213 | 3:8,326,715-8,327,355 | - | C1H3g19352 | CX3g029289 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| C2H3g12016 | 3:8,331,179-8,332,752 | - | C1H3g17646 | - | LOC_Os03g17130 | Os03g0279500 | - | Detail |
| C2H3g23941 | 3:8,336,452-8,337,304 | - | C1H3g17646 | CX3g028159 | LOC_Os03g17140 | Os03g0279600 | - | Detail |
| C2H3g05642 | 3:8,342,572-8,343,135 | - | C1H3g07955 | CX3g030469 | LOC_Os03g17150 | Os03g0279700 | - | Detail |
| C2H3g27940 | 3:8,354,423-8,355,082 | + | C1H3g15555 | - | - | - | - | Detail |
| C2H3g08725 | 3:8,356,118-8,362,491 | + | C1H3g10805 | CX3g028650 | LOC_Os03g17164 | Os03g0279816 | - | Detail |
| C2H3g26591 | 3:8,364,020-8,364,499 | - | - | - | - | - | - | Detail |
| C2H3g11175 | 3:8,366,154-8,367,794 | + | C1H3g09044 | - | LOC_Os03g17170 | Os03g0279900 | - | Detail |
| C2H3g19320 | 3:8,368,423-8,370,162 | + | C1H3g24073 | - | LOC_Os03g17174 | Os03g0279950 | - | Detail |
| C2H3g05359 | 3:8,370,472-8,379,418 | - | C1H3g05773 | CX3g030780 | LOC_Os03g17180 | Os03g0280000 | - | Detail |
| C2H3g01051 | 3:8,388,375-8,389,170 | + | C1H3g27832 | - | LOC_Os03g17200 | Os03g0280400 | - | Detail |
| C2H3g30122 | 3:8,391,668-8,394,439 | - | C1H5g30033 | CX6g041640 | - | Os04g0412350 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |