| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g30409 | 6:18,342,460-18,351,804 | + | C2H6g09581 | CX6g044312 | LOC_Os06g36080 | Os06g0554700 | - | Detail |
| C1H6g12887 | 6:18,352,318-18,365,457 | - | C2H6g20811 | CX6g044731 | LOC_Os06g36090 | Os06g0554800 | - | Detail |
| C1H6g18940 | 6:18,379,612-18,383,047 | + | C2H6g19558 | CX6g045470 | LOC_Os06g36160 | Os06g0555400 | - | Detail |
| C1H6g27356 | 6:18,383,853-18,387,163 | - | C2H6g01553 | CX6g041699 | LOC_Os06g36170 | Os06g0555500 | - | Detail |
| C1H6g25734 | 6:18,396,642-18,399,434 | - | C2H6g08197 | CX6g045859 | LOC_Os04g55280 | Os04g0646000 | - | Detail |
| C1H6g05986 | 6:18,400,477-18,401,920 | - | C2H6g02285 | CX6g041977 | LOC_Os01g63890 | Os04g0646100 | - | Detail |
| C1H6g09123 | 6:18,421,362-18,430,205 | + | C2H6g03125 | CX6g044183 | LOC_Os06g36180 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g31088 | 6:18,451,454-18,455,209 | + | C2H6g24860 | CX6g044183 | LOC_Os06g36210 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g04383 | 6:18,455,547-18,456,599 | + | C2H6g20565 | CX6g042707 | LOC_Os06g36210 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g20721 | 6:18,459,013-18,463,635 | - | C2H6g04951 | CX6g043932 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| C1H6g19530 | 6:18,464,830-18,470,493 | - | C2H6g00925 | CX6g043875 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| C1H6g25463 | 6:18,477,053-18,477,663 | + | C2H6g03428 | CX6g045462 | LOC_Os06g36240 | Os06g0556600 | - | Detail |
| C1H6g05440 | 6:18,500,814-18,502,005 | - | C2H6g00804 | - | - | - | - | Detail |
| C1H6g14762 | 6:18,521,513-18,526,151 | + | C2H6g20088 | CX6g045760 | LOC_Os06g36270 | Os06g0557100 | - | Detail |
| C1H6g25128 | 6:18,567,862-18,568,770 | + | C2H6g28947 | CX6g045760 | LOC_Os06g36320 | Os06g0557700 | - | Detail |
| C1H6g06230 | 6:18,575,227-18,575,826 | + | C2H6g11791 | CX6g042210 | LOC_Os06g36320 | Os06g0557700 | - | Detail |
| C1H6g05685 | 6:18,630,560-18,637,243 | - | C2H6g27740 | CX6g043607 | LOC_Os06g36360 | Os06g0558766 | - | Detail |
| C1H6g20753 | 6:18,660,671-18,661,952 | + | C2H6g07116 | CX6g041768 | LOC_Os06g36390 | Os06g0559400 | - | Detail |
| C1H6g11485 | 6:18,662,491-18,665,569 | - | C2H6g12142 | CX6g043353 | LOC_Os06g36400 | Os06g0559500 | - | Detail |
| C1H6g21786 | 6:18,671,291-18,673,620 | - | C2H6g13654 | CX6g043474 | LOC_Os06g36450 | Os06g0560000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g02770 | 2:30,253,424-30,260,808 | + | C1H2g30454 | CX2g020110 | LOC_Os02g54110 | Os02g0782100 | - | Detail |
| C2H2g28274 | 2:30,265,067-30,274,318 | - | C1H2g30222 | CX2g019882 | LOC_Os02g54120 | Os02g0782200 | - | Detail |
| C2H2g10589 | 2:30,274,286-30,275,888 | + | - | - | - | Os02g0782366 | - | Detail |
| C2H2g04470 | 2:30,275,708-30,279,705 | - | C1H2g00214 | CX2g020925 | LOC_Os02g54130 | Os02g0782300 | - | Detail |
| C2H2g11463 | 2:30,279,710-30,280,018 | - | C1H2g00214 | - | - | - | - | Detail |
| C2H2g20685 | 2:30,284,999-30,285,814 | + | C1H2g14839 | CX2g019799 | LOC_Os02g54140 | Os02g0782500 | - | Detail |
| C2H2g29708 | 2:30,294,800-30,302,774 | + | C1H2g22644 | CX2g022718 | LOC_Os02g54150 | Os02g0782600 | - | Detail |
| C2H2g28827 | 2:30,303,968-30,306,832 | - | C1H2g28476 | CX2g024767 | LOC_Os02g54160 | Os02g0782700 | - | Detail |
| C2H2g11197 | 2:30,312,822-30,314,933 | + | C1H2g05909 | CX2g024082 | LOC_Os02g54290 | Os02g0782800 | DES4 | Detail |
| C2H2g07779 | 2:30,320,493-30,323,243 | + | C1H2g01675 | CX2g024082 | LOC_Os02g54280 | Os02g0784100 | - | Detail |
| C2H2g14301 | 2:30,324,080-30,324,753 | + | C1H2g27647 | CX2g024797 | LOC_Os02g54180 | Os02g0782900 | - | Detail |
| C2H2g06014 | 2:30,325,061-30,327,476 | - | C1H2g29232 | CX2g021961 | LOC_Os02g54190 | Os02g0783000 | - | Detail |
| C2H2g04597 | 2:30,328,210-30,331,336 | - | C1H2g04161 | CX2g023276 | LOC_Os02g54200 | Os02g0783100 | - | Detail |
| C2H2g29612 | 2:30,338,093-30,350,232 | + | C1H2g13030 | CX2g023139 | LOC_Os02g54254 | Os02g0783700 | OsLKR/SDH | Detail |
| C2H2g20152 | 2:30,352,015-30,353,237 | - | C1H2g18049 | CX2g023165 | - | Os02g0299200 | - | Detail |
| C2H2g09783 | 2:30,354,027-30,358,137 | - | C1H2g23112 | CX2g021182 | LOC_Os02g54340 | Os02g0784700 | OsRpt1b | Detail |
| C2H2g10153 | 2:30,360,807-30,361,283 | - | C1H2g28654 | CX2g021993 | LOC_Os02g54360 | Os02g0784900 | - | Detail |
| C2H2g12061 | 2:30,367,139-30,368,125 | - | - | CX2g020982 | LOC_Os02g54370 | Os02g0785000 | - | Detail |
| C2H2g12917 | 2:30,371,850-30,372,776 | - | - | CX2g023412 | LOC_Os02g54390 | Os02g0785200 | - | Detail |
| C2H2g03301 | 2:30,376,031-30,376,960 | - | - | CX2g021341 | LOC_Os02g54420 | Os02g0785200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |