| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g30523 | 6:17,935,763-17,937,358 | - | C2H6g12286 | - | LOC_Os06g35560 | Os06g0548200 | - | Detail |
| C1H6g02852 | 6:17,981,402-17,984,157 | - | C2H6g12089 | - | LOC_Os06g35630 | Os06g0549300 | - | Detail |
| C1H6g20392 | 6:18,012,058-18,012,480 | + | C2H6g26669 | - | - | - | - | Detail |
| C1H6g05291 | 6:18,013,714-18,015,288 | - | C2H6g24090 | - | LOC_Os06g35650 | Os06g0549600 | - | Detail |
| C1H6g25462 | 6:18,036,977-18,039,353 | - | C2H6g01886 | CX6g045454 | LOC_Os06g35730 | Os06g0550000 | - | Detail |
| C1H6g07327 | 6:18,060,561-18,065,408 | - | C2H6g10555 | CX6g044667 | LOC_Os06g35814 | Os06g0551400 | OsRab11, ric2 | Detail |
| C1H6g25938 | 6:18,071,634-18,072,218 | + | C2H6g03448 | CX6g045817 | LOC_Os06g35830 | Os06g0551500 | - | Detail |
| C1H6g15247 | 6:18,117,450-18,119,187 | + | C2H6g15987 | CX6g041292 | LOC_Os06g35860 | Os06g0524700 | - | Detail |
| C1H6g02183 | 6:18,130,349-18,130,903 | - | C2H6g21675 | CX6g041627 | LOC_Os06g35890 | - | - | Detail |
| C1H6g30465 | 6:18,132,297-18,134,794 | + | C2H6g02875 | CX6g043086 | LOC_Os06g35900 | Os06g0552300 | - | Detail |
| C1H6g29774 | 6:18,138,514-18,142,373 | - | C2H6g19580 | CX6g043043 | LOC_Os06g35910 | Os06g0552400 | - | Detail |
| C1H6g12612 | 6:18,156,181-18,157,327 | + | C2H6g00486 | CX6g042888 | LOC_Os06g35930 | Os06g0552700 | - | Detail |
| C1H6g30558 | 6:18,170,291-18,172,456 | - | C2H6g07179 | CX6g042912 | LOC_Os06g35940 | Os06g0552900 | OsFTL12 | Detail |
| C1H6g12386 | 6:18,195,679-18,197,938 | - | C2H6g23400 | CX6g045232 | LOC_Os06g35960 | Os06g0553100 | - | Detail |
| C1H6g10321 | 6:18,231,883-18,232,876 | - | C2H6g02377 | CX6g041276 | LOC_Os06g35970 | Os06g0553200 | - | Detail |
| C1H6g07777 | 6:18,241,937-18,243,480 | + | - | - | - | Os05g0283000 | - | Detail |
| C1H6g22773 | 6:18,294,347-18,295,081 | - | C2H6g25179 | CX6g045888 | LOC_Os06g36010 | Os06g0553800 | - | Detail |
| C1H6g14473 | 6:18,303,597-18,304,503 | - | C2H6g11618 | - | - | Os06g0554200 | - | Detail |
| C1H6g10481 | 6:18,306,015-18,306,722 | - | C2H6g26819 | CX6g041858 | LOC_Os06g36040 | Os06g0554200 | - | Detail |
| C1H6g08855 | 6:18,309,195-18,312,911 | - | - | CX6g041635 | LOC_Os06g36050 | Os06g0554300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02801 | 1:22,781,895-22,783,760 | + | C1H1g02990 | CX1g003750 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| C2H1g14029 | 1:22,800,599-22,804,042 | + | C1H1g03527 | CX1g001073 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C2H1g03825 | 1:22,806,305-22,807,773 | + | C1H1g07657 | CX8g052292 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C2H1g05065 | 1:22,812,063-22,818,989 | - | C1H1g22176 | CX1g000646 | LOC_Os01g44430 | Os01g0635600 | - | Detail |
| C2H1g18946 | 1:22,832,565-22,835,056 | - | C1H1g27414 | CX1g003935 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| C2H1g07403 | 1:22,844,565-22,848,440 | + | C1H1g00331 | CX1g001605 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| C2H1g02176 | 1:22,850,866-22,853,732 | - | C1H1g13180 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C2H1g26854 | 1:22,854,799-22,862,607 | - | C1H1g21121 | CX1g006855 | LOC_Os01g44990 | Os01g0636700 | OsCHR745, CHR745 | Detail |
| C2H1g21987 | 1:22,872,357-22,877,333 | - | C1H1g23587 | CX1g002420 | LOC_Os01g45020 | Os01g0637100 | - | Detail |
| C2H1g25141 | 1:22,894,595-22,896,402 | - | - | CX1g003226 | LOC_Os01g45040 | Os01g0637300 | - | Detail |
| C2H1g19088 | 1:22,902,539-22,906,552 | + | C1H1g00331 | CX1g001605 | LOC_Os01g45060 | Os01g0637500 | OsPG3 | Detail |
| C2H1g22263 | 1:22,908,608-22,911,930 | - | C1H1g13180 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C2H1g15078 | 1:22,915,510-22,916,308 | + | C1H1g21245 | CX1g000311 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| C2H1g07012 | 1:22,958,679-22,959,299 | + | C1H1g25999 | CX1g003479 | LOC_Os01g45160 | Os01g0638800 | - | Detail |
| C2H1g28691 | 1:22,969,162-22,972,367 | + | C1H1g28061 | CX1g000740 | LOC_Os01g45190 | Os01g0639100 | OsRH2 | Detail |
| C2H1g30211 | 1:22,973,098-22,976,456 | - | C1H1g08315 | CX1g002505 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| C2H1g06985 | 1:22,978,466-22,979,033 | - | C1H1g08315 | CX1g002505 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| C2H1g17536 | 1:23,015,736-23,024,618 | + | C1H1g11479 | CX1g002383 | LOC_Os01g45274 | Os01g0639900 | BETACA1, OsβCA1, OsbCA1 | Detail |
| C2H1g27294 | 1:23,027,541-23,031,034 | + | C1H1g17843 | CX1g007210 | LOC_Os01g45290 | Os01g0640000 | - | Detail |
| C2H1g21978 | 1:23,032,721-23,038,389 | - | C1H1g22957 | CX1g000695 | LOC_Os01g45320 | Os01g0640200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |