| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10906 | 1:25,589,113-25,593,282 | + | C2H1g01798 | CX1g005199 | LOC_Os01g49920 | Os01g0694100 | - | Detail |
| C1H1g14019 | 1:25,594,591-25,599,199 | - | C2H1g29437 | CX1g005889 | LOC_Os01g49930 | Os01g0694200 | - | Detail |
| C1H1g11575 | 1:25,603,007-25,618,327 | - | C2H1g02878 | CX1g000910 | LOC_Os01g49940 | Os01g0694300 | - | Detail |
| C1H1g23983 | 1:25,627,090-25,633,042 | + | C2H1g12436 | CX1g003379 | LOC_Os01g50010 | Os01g0694900 | - | Detail |
| C1H1g09854 | 1:25,637,615-25,642,539 | + | C2H1g09448 | CX1g006314 | LOC_Os01g50030 | Os01g0695100 | OsPEAMT1 | Detail |
| C1H1g24840 | 1:25,644,837-25,649,345 | + | C2H1g20938 | CX1g000495 | LOC_Os01g50040 | Os01g0695200 | - | Detail |
| C1H1g15839 | 1:25,649,730-25,652,780 | - | C2H1g12268 | CX1g005052 | LOC_Os01g50050 | Os01g0695300 | OsFPS3 | Detail |
| C1H1g09427 | 1:25,653,636-25,656,327 | - | C2H1g10720 | CX1g001238 | LOC_Os01g50060 | Os01g0695600 | - | Detail |
| C1H1g28535 | 1:25,667,382-25,678,626 | + | C2H1g19234 | CX1g000682 | LOC_Os01g50080 | Os01g0290700 | - | Detail |
| C1H1g24452 | 1:25,679,080-25,679,607 | + | C2H1g29650 | CX1g004640 | - | - | - | Detail |
| C1H1g20551 | 1:25,680,467-25,686,940 | - | C2H1g26297 | CX1g004821 | LOC_Os01g50100 | Os01g0695800 | - | Detail |
| C1H1g28063 | 1:25,697,209-25,698,160 | + | C2H1g18904 | CX1g003608 | LOC_Os01g50110 | Os01g0695900 | Os2R_MYB11 | Detail |
| C1H1g21196 | 1:25,699,629-25,704,334 | + | C2H1g25152 | CX1g004393 | LOC_Os01g50120 | Os01g0696000 | - | Detail |
| C1H1g00928 | 1:25,701,724-25,703,320 | - | C2H1g29550 | CX1g001262 | - | Os01g0696100 | - | Detail |
| C1H1g28913 | 1:25,716,820-25,723,816 | + | C2H1g29725 | CX1g003854 | LOC_Os01g50160 | Os01g0695800 | - | Detail |
| C1H1g01002 | 1:25,743,949-25,746,686 | - | C2H1g21453 | CX1g006665 | LOC_Os01g50259 | Os01g0697700 | - | Detail |
| C1H1g31100 | 1:25,747,726-25,748,241 | - | C2H1g03629 | CX1g006665 | LOC_Os01g50259 | Os01g0697400 | - | Detail |
| C1H1g25912 | 1:25,754,058-25,754,680 | - | C2H1g13369 | CX1g006665 | LOC_Os01g50290 | Os01g0697700 | - | Detail |
| C1H1g00835 | 1:25,763,585-25,768,976 | + | C2H1g28295 | CX1g002329 | LOC_Os01g50320 | Os01g0698100 | - | Detail |
| C1H1g04459 | 1:25,770,999-25,775,417 | + | C2H1g16612 | CX1g000760 | LOC_Os01g50340 | Os01g0698300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g05843 | 1:4,407,490-4,408,767 | + | C1H1g27970 | CX1g005975 | LOC_Os01g09730 | Os01g0193400 | - | Detail |
| C2H1g21862 | 1:4,408,888-4,411,145 | - | C1H1g11468 | CX1g003550 | LOC_Os01g09740 | Os01g0193500 | - | Detail |
| C2H1g17174 | 1:4,413,170-4,417,512 | - | C1H1g10688 | CX1g000614 | LOC_Os01g09750 | Os01g0193600 | - | Detail |
| C2H1g04548 | 1:4,423,648-4,432,522 | + | C1H1g13152 | CX1g006629 | LOC_Os01g09760 | Os01g0193900 | OsALYL1 | Detail |
| C2H1g08327 | 1:4,432,798-4,436,269 | - | C1H1g06151 | CX1g002400 | LOC_Os01g09770 | Os01g0194000 | - | Detail |
| C2H1g05163 | 1:4,446,890-4,449,014 | - | C1H1g16281 | CX1g002653 | LOC_Os01g09790 | Os01g0194200 | - | Detail |
| C2H1g20037 | 1:4,454,004-4,458,589 | - | C1H1g29130 | CX1g000713 | LOC_Os01g09800 | Os01g0194300 | NH1, OsNH1, OsNPR1, OsNPR1/NH1, NPR1, OsPR2, PR2 | Detail |
| C2H1g05731 | 1:4,471,137-4,471,517 | + | C1H1g15115 | CX1g000442 | LOC_Os01g09830 | Os01g0194600 | - | Detail |
| C2H1g26832 | 1:4,481,098-4,483,672 | + | C1H1g00947 | CX1g005498 | LOC_Os01g09850 | Os01g0195000 | OsIDD2 | Detail |
| C2H1g03615 | 1:4,491,235-4,498,330 | - | C1H1g03034 | CX1g000509 | LOC_Os01g09860 | Os01g0195200 | - | Detail |
| C2H1g17887 | 1:4,508,755-4,509,393 | - | C1H1g10561 | CX1g001794 | LOC_Os01g09870 | Os01g0195300 | - | Detail |
| C2H1g12953 | 1:4,510,080-4,512,668 | - | - | - | - | - | - | Detail |
| C2H1g30117 | 1:4,514,337-4,515,203 | - | C1H1g31641 | CX1g003898 | LOC_Os01g09880 | Os01g0195400 | - | Detail |
| C2H1g28884 | 1:4,521,724-4,524,029 | - | C1H1g28666 | CX1g000703 | LOC_Os01g09890 | Os01g0195500 | - | Detail |
| C2H1g00669 | 1:4,526,288-4,526,542 | + | C1H1g30631 | - | - | - | - | Detail |
| C2H1g23471 | 1:4,532,493-4,532,820 | + | C1H1g18771 | CX1g006997 | LOC_Os01g09900 | Os01g0195700 | - | Detail |
| C2H1g25043 | 1:4,532,942-4,533,980 | + | C1H1g02897 | CX1g006997 | LOC_Os01g09900 | Os01g0195801 | - | Detail |
| C2H1g19433 | 1:4,541,970-4,542,264 | - | C1H1g13131 | CX12g016171 | LOC_Os12g41650 | Os12g0610200 | OsPIL11, OsbHLH102 | Detail |
| C2H1g29514 | 1:4,549,728-4,555,017 | + | C1H1g28746 | CX1g006997 | LOC_Os01g09930 | Os01g0196300 | DPF, OsbHLH025 | Detail |
| C2H1g19303 | 1:4,570,603-4,572,287 | + | C1H1g18771 | CX1g006997 | LOC_Os01g09990 | Os01g0196300 | DPF, OsbHLH025 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |