| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g15783 | 6:15,562,910-15,566,238 | - | C2H6g22301 | CX6g043543 | LOC_Os06g22660 | Os06g0332600 | - | Detail |
| C1H6g12037 | 6:15,579,407-15,581,621 | + | C2H6g09049 | CX6g044702 | LOC_Os06g22654 | Os06g0332500 | - | Detail |
| C1H6g19506 | 6:15,583,201-15,591,471 | - | C2H6g08521 | CX6g042511 | LOC_Os06g22650 | Os06g0332400 | - | Detail |
| C1H6g12048 | 6:15,601,427-15,602,926 | - | - | CX6g044220 | LOC_Os06g22600 | Os06g0331900 | - | Detail |
| C1H6g20948 | 6:15,669,970-15,672,275 | - | C2H6g13258 | - | LOC_Os06g30760 | - | - | Detail |
| C1H6g10286 | 6:15,681,215-15,685,500 | - | C2H6g12922 | CX6g042971 | LOC_Os06g30750 | Os06g0503400 | - | Detail |
| C1H6g26484 | 6:15,714,110-15,715,987 | + | C2H6g08007 | CX6g044810 | LOC_Os06g30730 | Os06g0503100 | - | Detail |
| C1H6g14188 | 6:15,724,400-15,725,911 | - | C2H6g13647 | CX6g045929 | LOC_Os06g30710 | Os06g0502900 | - | Detail |
| C1H6g11062 | 6:15,788,955-15,795,023 | + | C2H6g24697 | CX6g041387 | LOC_Os06g30700 | Os06g0502800 | - | Detail |
| C1H6g27686 | 6:15,815,145-15,820,143 | - | C2H6g09315 | - | LOC_Os06g30680 | - | - | Detail |
| C1H6g02542 | 6:15,820,932-15,821,312 | - | C2H6g09315 | - | LOC_Os06g30680 | - | - | Detail |
| C1H6g16467 | 6:15,875,998-15,878,886 | - | C2H6g26556 | - | LOC_Os06g16040 | Os06g0271400 | - | Detail |
| C1H6g22494 | 6:15,959,961-15,973,669 | - | C2H6g03410 | CX6g043950 | LOC_Os06g22550 | Os06g0331300 | - | Detail |
| C1H6g25339 | 6:16,043,709-16,044,299 | - | C2H6g28684 | CX1g003326 | LOC_Os11g03280 | Os11g0126500 | - | Detail |
| C1H6g28196 | 6:16,054,314-16,085,791 | - | C2H6g01043 | CX6g044956 | LOC_Os06g30894 | Os06g0505100 | - | Detail |
| C1H6g26122 | 6:16,088,990-16,089,947 | + | - | - | - | - | - | Detail |
| C1H6g25110 | 6:16,089,957-16,094,534 | + | C2H6g09051 | CX6g042361 | LOC_Os06g30910 | Os06g0505400 | - | Detail |
| C1H6g24962 | 6:16,098,287-16,100,624 | + | C2H6g22604 | CX6g043862 | - | Os06g0505700 | - | Detail |
| C1H6g07322 | 6:16,118,927-16,122,197 | + | - | - | - | - | - | Detail |
| C1H6g31826 | 6:16,124,665-16,126,497 | + | C2H6g18363 | CX6g045779 | LOC_Os06g30930 | Os06g0506000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22497 | 4:608,553-609,763 | + | C1H4g22895 | CX4g034880 | LOC_Os04g01930 | Os04g0109900 | - | Detail |
| C2H4g13476 | 4:661,919-668,448 | + | C1H4g18566 | CX4g032566 | LOC_Os04g01970 | Os04g0110300 | - | Detail |
| C2H4g23508 | 4:670,151-672,685 | + | C1H4g12929 | CX4g034294 | LOC_Os04g01980 | Os04g0110400 | - | Detail |
| C2H4g21870 | 4:677,322-682,276 | - | C1H4g14298 | CX4g032574 | LOC_Os04g02000 | Os04g0110600 | OsSTL1 | Detail |
| C2H4g18873 | 4:687,564-689,253 | - | C1H4g28215 | CX4g031548 | - | - | - | Detail |
| C2H4g25092 | 4:709,146-710,670 | + | C1H4g05772 | CX4g035956 | LOC_Os04g02030 | Os04g0111100 | - | Detail |
| C2H4g22392 | 4:713,746-718,166 | - | C1H4g05772 | CX4g035956 | LOC_Os04g02030 | Os04g0111100 | - | Detail |
| C2H4g08632 | 4:721,545-723,301 | + | C1H4g20764 | CX4g036450 | LOC_Os09g25740 | Os04g0536300 | YAB5, OsYABBY5, OsYAB3, YAB3, Os YABBY5, TOB1 | Detail |
| C2H4g19107 | 4:723,807-727,848 | - | C1H4g08342 | CX4g034175 | LOC_Os04g02050 | Os04g0111200 | - | Detail |
| C2H4g16798 | 4:733,199-737,429 | - | C1H4g15454 | CX4g031586 | LOC_Os04g02140 | Os04g0112200 | OsE2Fc | Detail |
| C2H4g05319 | 4:740,677-747,238 | - | C1H4g00631 | CX4g033275 | LOC_Os04g02150 | Os04g0112300 | - | Detail |
| C2H4g29574 | 4:754,582-757,461 | + | C1H4g07839 | CX4g032358 | LOC_Os04g02500 | Os04g0115400 | - | Detail |
| C2H4g06234 | 4:762,329-765,855 | + | C1H4g24213 | CX4g032534 | LOC_Os04g02510 | Os04g0115500 | OsTIF1 | Detail |
| C2H4g07573 | 4:772,840-778,752 | - | C1H4g16974 | CX4g032131 | LOC_Os04g02550 | Os04g0115650 | - | Detail |
| C2H4g18135 | 4:791,005-792,634 | - | C1H4g16974 | CX4g032921 | LOC_Os04g02520 | Os04g0115650 | - | Detail |
| C2H4g05459 | 4:800,687-804,647 | - | C1H2g20339 | CX4g035069 | LOC_Os02g22580 | Os10g0388600 | - | Detail |
| C2H4g11156 | 4:812,094-816,431 | - | C1H4g10301 | CX4g034543 | LOC_Os07g15160 | Os04g0357300 | - | Detail |
| C2H4g01183 | 4:817,308-821,222 | - | - | CX4g034543 | - | - | - | Detail |
| C2H4g17583 | 4:823,317-823,728 | + | - | - | - | - | - | Detail |
| C2H4g14840 | 4:826,123-833,410 | - | C1H4g26900 | CX4g036593 | LOC_Os04g02550 | Os04g0115650 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |