| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10960 | 6:11,997,746-12,004,793 | - | C2H6g10288 | CX6g045814 | LOC_Os06g28720 | Os06g0481900 | - | Detail |
| C1H6g24995 | 6:12,083,602-12,086,393 | - | C2H6g03779 | - | - | - | - | Detail |
| C1H6g10835 | 6:12,142,225-12,148,780 | + | C2H6g19981 | CX6g045746 | LOC_Os06g28590 | Os06g0480000 | - | Detail |
| C1H6g21775 | 6:12,167,335-12,168,136 | + | C2H6g01572 | CX6g041290 | LOC_Os06g28550 | Os06g0479400 | - | Detail |
| C1H6g00087 | 6:12,169,263-12,169,520 | + | C2H6g01572 | CX6g041290 | LOC_Os06g27770 | Os06g0472200 | - | Detail |
| C1H6g26693 | 6:12,207,145-12,209,632 | - | C2H6g17787 | CX6g042654 | LOC_Os06g27760 | Os06g0472000 | - | Detail |
| C1H6g28055 | 6:12,212,478-12,215,512 | + | C2H6g20307 | CX6g043194 | LOC_Os06g27770 | Os06g0472200 | - | Detail |
| C1H6g16183 | 6:12,221,012-12,222,265 | - | - | - | - | Os06g0472350 | - | Detail |
| C1H6g06716 | 6:12,226,523-12,232,936 | + | C2H6g23546 | CX6g043241 | LOC_Os06g27800 | Os06g0472400 | - | Detail |
| C1H6g31838 | 6:12,245,451-12,246,063 | + | - | - | - | - | - | Detail |
| C1H6g09283 | 6:12,245,883-12,249,225 | - | C2H6g14928 | CX6g042696 | LOC_Os06g27820 | Os06g0472600 | - | Detail |
| C1H6g24132 | 6:12,251,185-12,255,696 | - | C2H6g00222 | CX6g045749 | LOC_Os06g27830 | Os06g0472700 | - | Detail |
| C1H6g08584 | 6:12,264,810-12,266,114 | + | C2H6g02911 | CX6g043316 | LOC_Os06g27850 | Os06g0472900 | - | Detail |
| C1H6g02757 | 6:12,269,524-12,273,613 | - | C2H6g30368 | CX6g041871 | LOC_Os06g27860 | Os06g0473000 | OsPHS1 | Detail |
| C1H6g12249 | 6:12,286,405-12,297,319 | - | C2H6g00393 | CX6g044841 | LOC_Os06g27890 | Os06g0473200 | MKK3, OsMKK3 | Detail |
| C1H6g13779 | 6:12,308,768-12,309,103 | + | C2H6g27648 | CX6g045224 | - | Os06g0473700 | - | Detail |
| C1H6g03161 | 6:12,318,806-12,328,159 | - | C2H6g25625 | CX6g044575 | LOC_Os06g27970 | Os06g0474200 | OsFIP | Detail |
| C1H6g15989 | 6:12,341,598-12,345,314 | - | C2H6g05701 | CX6g043983 | LOC_Os06g28000 | Os06g0474500 | - | Detail |
| C1H6g14721 | 6:12,351,276-12,352,036 | - | C2H6g23516 | CX1g001472 | LOC_Os06g28030 | Os06g0474600 | - | Detail |
| C1H6g09338 | 6:12,367,302-12,368,758 | - | C2H6g13355 | CX6g043337 | LOC_Os06g28050 | Os06g0498450 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03998 | 1:2,164,077-2,165,131 | - | C1H1g29078 | CX1g003888 | LOC_Os01g05370 | Os01g0144800 | - | Detail |
| C2H1g05408 | 1:2,174,818-2,178,246 | + | C1H1g29078 | CX1g003888 | LOC_Os01g05410 | Os01g0147001 | - | Detail |
| C2H1g08018 | 1:2,185,334-2,189,822 | + | C1H1g18605 | CX1g000323 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| C2H1g25573 | 1:2,191,220-2,194,402 | + | C1H1g08705 | CX1g001325 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| C2H1g12465 | 1:2,194,554-2,196,403 | - | C1H1g07217 | CX1g003030 | LOC_Os01g05440 | Os01g0147400 | - | Detail |
| C2H1g27793 | 1:2,197,356-2,199,409 | - | C1H1g03816 | - | LOC_Os01g05450 | Os01g0147600 | - | Detail |
| C2H1g00931 | 1:2,200,826-2,203,456 | - | C1H1g25686 | - | LOC_Os01g05460 | Os01g0147600 | - | Detail |
| C2H1g02244 | 1:2,205,153-2,207,498 | - | C1H1g30607 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C2H1g25353 | 1:2,210,513-2,219,278 | - | C1H1g11928 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C2H1g29480 | 1:2,221,494-2,225,565 | - | C1H1g17304 | CX1g005120 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| C2H1g30066 | 1:2,226,864-2,230,987 | - | C1H1g08404 | CX1g006525 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| C2H1g25150 | 1:2,236,272-2,249,202 | + | C1H1g03903 | CX1g001423 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| C2H1g10498 | 1:2,256,405-2,259,371 | - | C1H1g24472 | CX1g005368 | LOC_Os01g05620 | Os01g0149500 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59 | Detail |
| C2H1g18971 | 1:2,261,730-2,262,191 | + | C1H1g09766 | CX1g005739 | LOC_Os01g05630 | Os01g0149600 | H2B | Detail |
| C2H1g06791 | 1:2,263,340-2,266,739 | - | C1H1g22469 | CX1g006643 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| C2H1g28846 | 1:2,268,550-2,269,982 | - | C1H1g18521 | - | LOC_Os01g05650 | Os01g0149800 | - | Detail |
| C2H1g25044 | 1:2,274,627-2,278,471 | - | C1H1g17924 | CX1g006502 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| C2H1g00511 | 1:2,283,854-2,287,505 | - | C1H1g30008 | CX1g002286 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| C2H1g17834 | 1:2,289,627-2,293,258 | + | C1H1g15806 | CX1g000079 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| C2H1g21300 | 1:2,294,207-2,296,973 | + | C1H1g24721 | CX4g035052 | LOC_Os01g05694 | Os01g0150200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |