| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g30594 | 1:25,375,029-25,376,006 | - | C2H1g20651 | CX1g005155 | LOC_Os01g49614 | Os01g0689900 | - | Detail |
| C1H1g28357 | 1:25,386,881-25,387,861 | - | C2H1g03260 | CX1g005155 | LOC_Os01g49560 | Os01g0690200 | - | Detail |
| C1H1g12707 | 1:25,414,239-25,415,280 | + | C2H1g21144 | CX1g005155 | LOC_Os01g49614 | Os01g0689900 | - | Detail |
| C1H1g22621 | 1:25,422,608-25,425,737 | + | C2H1g25605 | CX1g002944 | LOC_Os01g49580 | Os01g0691050 | - | Detail |
| C1H1g10530 | 1:25,432,648-25,434,231 | + | C2H1g21144 | CX1g005155 | LOC_Os01g49614 | Os01g0690900 | - | Detail |
| C1H1g27228 | 1:25,444,284-25,446,735 | + | C2H1g18077 | CX1g002944 | LOC_Os01g47070 | Os01g0691050 | - | Detail |
| C1H1g29046 | 1:25,447,391-25,448,527 | - | C2H1g22688 | CX1g001683 | LOC_Os01g49640 | Os01g0691300 | - | Detail |
| C1H1g12678 | 1:25,449,213-25,450,475 | + | C2H1g26124 | CX1g006685 | LOC_Os01g49660 | Os01g0691400 | - | Detail |
| C1H1g11648 | 1:25,450,795-25,454,677 | - | C2H1g16571 | CX1g003503 | LOC_Os01g49670 | Os01g0691500 | - | Detail |
| C1H1g24416 | 1:25,454,787-25,462,700 | + | C2H1g18353 | CX1g003138 | LOC_Os01g49680 | Os01g0691600 | - | Detail |
| C1H1g26359 | 1:25,464,402-25,468,863 | + | C2H1g17191 | CX1g001134 | LOC_Os01g49690 | Os01g0691700 | - | Detail |
| C1H1g16215 | 1:25,476,297-25,477,103 | - | C2H1g11955 | CX1g001038 | LOC_Os01g49710 | Os01g0692000 | - | Detail |
| C1H1g06263 | 1:25,479,937-25,480,734 | - | C2H1g27613 | CX1g001038 | LOC_Os01g49720 | Os01g0692100 | - | Detail |
| C1H1g08026 | 1:25,483,401-25,486,243 | + | C2H1g16812 | CX1g002278 | LOC_Os01g49740 | Os01g0692300 | - | Detail |
| C1H1g09942 | 1:25,492,594-25,497,097 | + | C2H1g01533 | CX1g004143 | LOC_Os01g49760 | Os01g0692600 | - | Detail |
| C1H1g28839 | 1:25,497,941-25,501,453 | - | C2H1g21603 | CX1g006365 | LOC_Os01g49770 | Os01g0692700 | OsSIRH2-23, OsRFPH2-23 | Detail |
| C1H1g28446 | 1:25,512,043-25,513,002 | + | C2H1g03137 | CX1g003738 | LOC_Os01g49810 | Os01g0693100 | - | Detail |
| C1H1g29386 | 1:25,518,670-25,520,517 | + | C2H1g09620 | CX1g001085 | LOC_Os01g49820 | Os01g0693300 | - | Detail |
| C1H1g28615 | 1:25,577,110-25,579,333 | - | C2H1g14365 | CX1g006741 | LOC_Os01g49900 | Os01g0693900 | - | Detail |
| C1H1g20356 | 1:25,584,472-25,587,933 | + | C2H1g09264 | CX1g002422 | LOC_Os01g49910 | Os01g0694000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21952 | 3:2,706,336-2,707,098 | + | - | - | LOC_Os03g06250 | Os03g0158600 | - | Detail |
| C2H3g18282 | 3:2,710,130-2,714,536 | - | C1H3g08402 | CX3g030115 | LOC_Os03g06290 | Os03g0158700 | - | Detail |
| C2H3g21729 | 3:2,714,937-2,716,403 | + | C1H3g27159 | CX3g028779 | LOC_Os03g13230 | Os03g0158900 | - | Detail |
| C2H3g27396 | 3:2,716,574-2,719,895 | - | C1H3g28868 | CX3g025128 | LOC_Os03g06290 | Os03g0158700 | - | Detail |
| C2H3g05214 | 3:2,723,208-2,726,317 | + | C1H3g19166 | CX3g026196 | LOC_Os03g06330 | Os03g0159100 | - | Detail |
| C2H3g05736 | 3:2,728,005-2,734,714 | + | C1H3g00562 | CX3g029258 | LOC_Os03g06340 | Os03g0159200 | - | Detail |
| C2H3g02146 | 3:2,736,955-2,737,632 | - | C1H3g03543 | CX3g031270 | LOC_Os03g06350 | Os03g0159400 | - | Detail |
| C2H3g07500 | 3:2,742,445-2,743,445 | - | C1H3g19003 | CX3g027894 | LOC_Os03g06360 | Os03g0159600 | - | Detail |
| C2H3g25960 | 3:2,744,050-2,745,670 | + | C1H3g22077 | CX3g031117 | LOC_Os03g06370 | Os03g0159700 | OsNBL3 | Detail |
| C2H3g24140 | 3:2,749,659-2,750,132 | - | C1H3g26257 | CX3g025627 | LOC_Os03g06390 | Os03g0159900 | - | Detail |
| C2H3g08821 | 3:2,754,362-2,761,304 | + | C1H3g14921 | CX3g025658 | LOC_Os03g06410 | Os03g0160100 | ACDR1, SPL3, OsEDR1, OsACDR1, EDR1 | Detail |
| C2H3g02952 | 3:2,761,840-2,764,637 | + | C1H3g04551 | - | - | - | - | Detail |
| C2H3g01208 | 3:2,765,754-2,766,050 | - | C1H3g16143 | CX3g027015 | LOC_Os03g06430 | Os03g0160300 | - | Detail |
| C2H3g27894 | 3:2,768,854-2,773,180 | - | C1H3g24862 | CX3g030159 | LOC_Os03g06440 | Os03g0160400 | OsDNA2_8 | Detail |
| C2H3g10921 | 3:2,782,383-2,785,427 | - | C1H3g27076 | CX3g027024 | LOC_Os03g06460 | Os03g0160600 | - | Detail |
| C2H3g17145 | 3:2,795,605-2,796,258 | - | C1H3g12946 | CX3g031001 | LOC_Os03g06480 | Os03g0160900 | - | Detail |
| C2H3g18147 | 3:2,804,232-2,804,662 | + | C1H3g01001 | - | LOC_Os03g06490 | Os03g0161000 | - | Detail |
| C2H3g23882 | 3:2,804,963-2,805,248 | + | C1H3g27407 | CX3g025715 | - | - | - | Detail |
| C2H3g19291 | 3:2,807,664-2,808,054 | + | C1H3g20415 | CX3g025715 | - | - | - | Detail |
| C2H3g21331 | 3:2,811,186-2,812,513 | + | C1H3g11018 | - | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |