| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g23192 | 6:9,903,582-9,906,286 | - | C2H6g22687 | CX6g044246 | LOC_Os06g21480 | Os06g0319700 | - | Detail |
| C1H6g15030 | 6:9,952,574-9,956,659 | - | C2H6g05819 | CX6g043466 | LOC_Os06g21470 | Os06g0319600 | - | Detail |
| C1H6g24512 | 6:9,958,132-9,962,035 | + | C2H6g29333 | - | - | Os06g0319366 | - | Detail |
| C1H6g17249 | 6:9,973,297-9,979,074 | - | C2H6g23908 | CX6g041922 | LOC_Os06g21390 | Os06g0318700 | MKRN, OsSIRP3 | Detail |
| C1H6g10203 | 6:9,982,113-9,985,953 | - | C2H6g16674 | CX6g044274 | LOC_Os06g21380 | Os06g0318600 | - | Detail |
| C1H6g31652 | 6:9,998,016-10,001,748 | - | C2H6g06294 | CX6g041234 | LOC_Os06g21360 | Os06g0318500 | - | Detail |
| C1H6g20482 | 6:10,007,509-10,010,298 | + | C2H6g04069 | CX6g041422 | - | Os06g0318300 | - | Detail |
| C1H6g29323 | 6:10,012,344-10,013,591 | - | C2H6g06961 | CX6g041700 | LOC_Os06g21330 | Os06g0318200 | - | Detail |
| C1H6g02304 | 6:10,014,541-10,015,089 | - | C2H6g22946 | CX6g041700 | LOC_Os06g21330 | Os06g0318200 | - | Detail |
| C1H6g13835 | 6:10,029,072-10,029,449 | - | C2H6g24536 | - | - | - | - | Detail |
| C1H6g25604 | 6:10,034,237-10,034,578 | - | C2H6g21088 | - | - | - | - | Detail |
| C1H6g26892 | 6:10,051,519-10,052,186 | - | C2H6g23460 | - | - | - | - | Detail |
| C1H6g25626 | 6:10,057,703-10,058,584 | + | C2H6g29048 | CX6g042665 | - | - | - | Detail |
| C1H6g06056 | 6:10,061,729-10,062,417 | - | C2H6g23460 | CX6g044894 | - | Os06g0316950 | - | Detail |
| C1H6g08206 | 6:10,079,613-10,080,442 | + | - | CX4g032765 | - | - | - | Detail |
| C1H6g20435 | 6:10,081,262-10,083,009 | + | - | - | - | - | - | Detail |
| C1H6g09647 | 6:10,101,778-10,102,534 | + | C2H6g26644 | CX6g044894 | LOC_Os06g21210 | Os06g0316800 | - | Detail |
| C1H6g03024 | 6:10,120,952-10,121,589 | - | C2H6g20522 | - | LOC_Os06g21140 | Os06g0316300 | - | Detail |
| C1H6g16954 | 6:10,128,095-10,130,889 | - | C2H6g22107 | CX6g044240 | LOC_Os06g21120 | Os06g0316100 | - | Detail |
| C1H6g01617 | 6:10,132,098-10,133,061 | - | C2H6g17870 | CX6g041973 | LOC_Os06g21110 | Os06g0316000 | Os2H16 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03777 | 6:7,003,407-7,004,426 | - | - | CX6g041399 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| C2H6g04113 | 6:7,007,145-7,008,692 | + | C1H6g02316 | CX6g044724 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| C2H6g00648 | 6:7,026,926-7,027,972 | + | C1H6g09969 | CX6g043290 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| C2H6g03619 | 6:7,084,002-7,098,976 | + | C1H6g11559 | CX6g045764 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| C2H6g01049 | 6:7,100,001-7,107,702 | - | C1H6g18024 | CX6g044644 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| C2H6g13770 | 6:7,153,337-7,153,943 | - | C1H6g12074 | CX6g041615 | - | - | - | Detail |
| C2H6g10609 | 6:7,163,058-7,163,564 | + | C1H6g12074 | CX6g045748 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| C2H6g05565 | 6:7,164,963-7,165,619 | + | - | CX6g042529 | - | - | - | Detail |
| C2H6g15261 | 6:7,187,480-7,191,271 | - | C1H6g28805 | CX6g041283 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| C2H6g21532 | 6:7,218,192-7,219,673 | - | - | CX6g045707 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| C2H6g29156 | 6:7,257,704-7,259,179 | + | - | CX6g041231 | LOC_Os06g15020 | Os06g0262200 | OsCUT6 | Detail |
| C2H6g22045 | 6:7,300,310-7,301,791 | - | - | CX6g043029 | LOC_Os06g15170 | Os06g0262800 | OsCUT7 | Detail |
| C2H6g13890 | 6:7,319,272-7,320,855 | + | - | - | - | - | - | Detail |
| C2H6g18864 | 6:7,320,873-7,321,216 | + | - | - | - | - | - | Detail |
| C2H6g20291 | 6:7,321,312-7,323,501 | - | - | CX6g043029 | LOC_Os06g15250 | Os06g0263400 | OsCUT8 | Detail |
| C2H6g11848 | 6:7,340,325-7,342,073 | + | C1H6g14061 | CX6g043939 | LOC_Os06g15330 | Os06g0264200 | OsCOL16 | Detail |
| C2H6g27689 | 6:7,357,477-7,363,510 | + | C1H6g03979 | CX6g044650 | LOC_Os06g15360 | Os06g0264300 | - | Detail |
| C2H6g23695 | 6:7,373,848-7,378,740 | + | C1H6g06916 | CX6g042595 | LOC_Os06g15370 | Os06g0264500 | OsNPF3.1 | Detail |
| C2H6g28059 | 6:7,378,868-7,379,221 | - | - | CX6g043321 | LOC_Os06g15380 | Os06g0264700 | - | Detail |
| C2H6g15511 | 6:7,380,099-7,380,488 | - | - | CX6g042083 | LOC_Os06g15390 | Os06g0264700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |