| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g16451 | 6:9,565,443-9,572,739 | - | C2H6g22125 | CX6g041237 | LOC_Os06g20040 | Os06g0304600 | - | Detail |
| C1H6g08869 | 6:9,592,391-9,602,634 | + | C2H6g11429 | CX6g041532 | LOC_Os06g20090 | Os06g0305200 | - | Detail |
| C1H6g20121 | 6:9,603,797-9,605,031 | - | - | - | - | - | - | Detail |
| C1H6g11013 | 6:9,619,499-9,620,995 | + | C2H6g14592 | CX6g042324 | LOC_Os06g20110 | Os06g0305400 | - | Detail |
| C1H6g06042 | 6:9,622,456-9,624,509 | + | C2H6g07528 | CX6g042324 | LOC_Os06g20120 | Os06g0305400 | - | Detail |
| C1H6g25354 | 6:9,628,592-9,631,862 | + | C2H6g07470 | CX6g045687 | LOC_Os06g20140 | Os06g0118000 | - | Detail |
| C1H6g00755 | 6:9,638,057-9,638,511 | + | C2H6g06402 | CX6g045294 | LOC_Os06g20180 | Os06g0306500 | - | Detail |
| C1H6g18397 | 6:9,640,476-9,645,548 | + | C2H6g06402 | CX6g045294 | LOC_Os06g20190 | Os06g0306500 | - | Detail |
| C1H6g22866 | 6:9,678,289-9,679,067 | + | - | - | - | - | - | Detail |
| C1H6g10015 | 6:9,684,050-9,686,449 | - | C2H6g20586 | CX6g043850 | LOC_Os06g21920 | Os06g0324800 | PT9, OsPT9, PHT1-9, OsPht1;9 | Detail |
| C1H6g02709 | 6:9,694,762-9,695,096 | + | C2H6g00738 | CX6g042175 | LOC_Os06g21910 | Os06g0324400 | - | Detail |
| C1H6g04429 | 6:9,704,253-9,708,011 | - | C2H6g18039 | CX6g045787 | LOC_Os06g21900 | Os06g0324300 | - | Detail |
| C1H6g19731 | 6:9,764,813-9,766,491 | - | C2H6g06621 | CX6g041388 | LOC_Os06g21820 | Os06g0323100 | - | Detail |
| C1H6g31747 | 6:9,795,947-9,797,603 | - | C2H6g06621 | CX6g041388 | LOC_Os06g21720 | Os06g0322400 | - | Detail |
| C1H6g09993 | 6:9,861,008-9,866,744 | + | C2H6g15965 | CX6g043034 | LOC_Os06g21600 | Os06g0320700 | - | Detail |
| C1H6g29854 | 6:9,869,699-9,871,226 | - | C2H6g07045 | CX6g043863 | LOC_Os06g21590 | Os06g0320500 | - | Detail |
| C1H6g30433 | 6:9,872,942-9,874,529 | + | - | - | - | - | - | Detail |
| C1H6g15151 | 6:9,884,288-9,888,894 | + | C2H6g13117 | CX6g043671 | LOC_Os06g21570 | Os06g0320200 | Os6BGlu24 | Detail |
| C1H6g07888 | 6:9,889,277-9,892,648 | - | C2H6g00743 | CX6g044452 | LOC_Os06g21560 | Os06g0320100 | - | Detail |
| C1H6g14935 | 6:9,895,203-9,895,714 | + | C2H6g30426 | CX6g045633 | LOC_Os06g21550 | Os06g0320000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21921 | 3:11,220,180-11,220,545 | - | C1H3g02489 | CX3g028477 | - | - | - | Detail |
| C2H3g27756 | 3:11,220,386-11,226,741 | + | C1H3g18174 | CX3g024945 | LOC_Os03g21990 | Os03g0339100 | - | Detail |
| C2H3g08189 | 3:11,228,016-11,229,869 | + | C1H3g23493 | CX3g029752 | LOC_Os03g22010 | Os03g0339300 | - | Detail |
| C2H3g17635 | 3:11,230,821-11,232,950 | + | C1H3g01797 | CX3g029752 | LOC_Os03g22020 | Os03g0434800 | - | Detail |
| C2H3g03307 | 3:11,234,346-11,235,564 | - | C1H3g30937 | CX3g026989 | LOC_Os03g22020 | Os03g0434800 | - | Detail |
| C2H3g17458 | 3:11,242,758-11,245,895 | + | C1H3g22536 | CX3g028644 | LOC_Os03g22040 | Os03g0339700 | - | Detail |
| C2H3g13815 | 3:11,248,081-11,250,782 | - | C1H3g12381 | CX3g029505 | LOC_Os03g22050 | Os03g0339900 | - | Detail |
| C2H3g21418 | 3:11,256,075-11,258,086 | - | C1H3g28303 | CX3g031266 | LOC_Os03g21900 | Os03g0337600 | - | Detail |
| C2H3g25583 | 3:11,259,712-11,261,137 | - | C1H3g04870 | CX3g031266 | LOC_Os03g22060 | Os03g0340001 | - | Detail |
| C2H3g07473 | 3:11,266,164-11,266,637 | + | C1H3g07849 | CX3g031157 | LOC_Os03g22080 | Os03g0340100 | - | Detail |
| C2H3g21937 | 3:11,284,459-11,290,258 | - | C1H3g19641 | CX3g027881 | LOC_Os03g22120 | Os03g0340500 | - | Detail |
| C2H3g11733 | 3:11,294,651-11,296,579 | + | C1H3g22688 | CX3g028679 | LOC_Os03g22140 | Os03g0340700 | - | Detail |
| C2H3g03250 | 3:11,300,480-11,311,386 | + | C1H3g27719 | CX3g031206 | LOC_Os03g22160 | Os03g0340900 | ARE2 | Detail |
| C2H3g25873 | 3:11,320,223-11,321,048 | + | C1H3g08303 | CX3g029548 | LOC_Os03g22170 | Os03g0341000 | ERF66, OsERF66 | Detail |
| C2H3g03921 | 3:11,324,406-11,326,606 | - | C1H3g00753 | CX3g028062 | LOC_Os03g22180 | Os03g0341100 | - | Detail |
| C2H3g07860 | 3:11,327,474-11,332,982 | - | C1H3g18892 | CX3g030546 | LOC_Os03g22190 | Os03g0341200 | - | Detail |
| C2H3g11247 | 3:11,335,967-11,338,118 | + | C1H3g26990 | CX3g027655 | LOC_Os03g22200 | Os03g0341300 | - | Detail |
| C2H3g16648 | 3:11,346,504-11,347,184 | - | C1H3g04911 | - | LOC_Os03g22210 | Os03g0341600 | - | Detail |
| C2H3g10184 | 3:11,355,961-11,356,580 | - | C1H3g20603 | - | LOC_Os03g22230 | Os03g0342100 | - | Detail |
| C2H3g15206 | 3:11,359,421-11,359,970 | - | C1H3g13653 | - | LOC_Os03g22210 | Os03g0341600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |