| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g16451 | 6:9,565,443-9,572,739 | - | C2H6g22125 | CX6g041237 | LOC_Os06g20040 | Os06g0304600 | - | Detail |
| C1H6g08869 | 6:9,592,391-9,602,634 | + | C2H6g11429 | CX6g041532 | LOC_Os06g20090 | Os06g0305200 | - | Detail |
| C1H6g20121 | 6:9,603,797-9,605,031 | - | - | - | - | - | - | Detail |
| C1H6g11013 | 6:9,619,499-9,620,995 | + | C2H6g14592 | CX6g042324 | LOC_Os06g20110 | Os06g0305400 | - | Detail |
| C1H6g06042 | 6:9,622,456-9,624,509 | + | C2H6g07528 | CX6g042324 | LOC_Os06g20120 | Os06g0305400 | - | Detail |
| C1H6g25354 | 6:9,628,592-9,631,862 | + | C2H6g07470 | CX6g045687 | LOC_Os06g20140 | Os06g0118000 | - | Detail |
| C1H6g00755 | 6:9,638,057-9,638,511 | + | C2H6g06402 | CX6g045294 | LOC_Os06g20180 | Os06g0306500 | - | Detail |
| C1H6g18397 | 6:9,640,476-9,645,548 | + | C2H6g06402 | CX6g045294 | LOC_Os06g20190 | Os06g0306500 | - | Detail |
| C1H6g22866 | 6:9,678,289-9,679,067 | + | - | - | - | - | - | Detail |
| C1H6g10015 | 6:9,684,050-9,686,449 | - | C2H6g20586 | CX6g043850 | LOC_Os06g21920 | Os06g0324800 | PT9, OsPT9, PHT1-9, OsPht1;9 | Detail |
| C1H6g02709 | 6:9,694,762-9,695,096 | + | C2H6g00738 | CX6g042175 | LOC_Os06g21910 | Os06g0324400 | - | Detail |
| C1H6g04429 | 6:9,704,253-9,708,011 | - | C2H6g18039 | CX6g045787 | LOC_Os06g21900 | Os06g0324300 | - | Detail |
| C1H6g19731 | 6:9,764,813-9,766,491 | - | C2H6g06621 | CX6g041388 | LOC_Os06g21820 | Os06g0323100 | - | Detail |
| C1H6g31747 | 6:9,795,947-9,797,603 | - | C2H6g06621 | CX6g041388 | LOC_Os06g21720 | Os06g0322400 | - | Detail |
| C1H6g09993 | 6:9,861,008-9,866,744 | + | C2H6g15965 | CX6g043034 | LOC_Os06g21600 | Os06g0320700 | - | Detail |
| C1H6g29854 | 6:9,869,699-9,871,226 | - | C2H6g07045 | CX6g043863 | LOC_Os06g21590 | Os06g0320500 | - | Detail |
| C1H6g30433 | 6:9,872,942-9,874,529 | + | - | - | - | - | - | Detail |
| C1H6g15151 | 6:9,884,288-9,888,894 | + | C2H6g13117 | CX6g043671 | LOC_Os06g21570 | Os06g0320200 | Os6BGlu24 | Detail |
| C1H6g07888 | 6:9,889,277-9,892,648 | - | C2H6g00743 | CX6g044452 | LOC_Os06g21560 | Os06g0320100 | - | Detail |
| C1H6g14935 | 6:9,895,203-9,895,714 | + | C2H6g30426 | CX6g045633 | LOC_Os06g21550 | Os06g0320000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03391 | 6:22,018,466-22,020,171 | + | - | CX10g010054 | LOC_Os10g21236 | - | - | Detail |
| C2H6g29467 | 6:22,020,966-22,021,531 | + | - | - | LOC_Os10g21230 | - | - | Detail |
| C2H6g26608 | 6:22,023,138-22,024,661 | + | C1H6g24215 | CX6g042100 | LOC_Os10g21240 | Os06g0568200 | - | Detail |
| C2H6g11551 | 6:22,027,926-22,029,599 | - | - | CX6g044619 | LOC_Os10g21250 | - | - | Detail |
| C2H6g06159 | 6:22,030,779-22,031,889 | - | - | CX6g043647 | LOC_Os10g21254 | - | - | Detail |
| C2H6g25362 | 6:22,037,482-22,037,907 | - | - | CX6g045339 | LOC_Os01g58022 | Os12g0423484 | - | Detail |
| C2H6g02598 | 6:22,053,748-22,054,128 | - | C1H6g11277 | CX2g023961 | LOC_Os06g41870 | Os06g0624000 | - | Detail |
| C2H6g02719 | 6:22,060,871-22,066,113 | + | C1H6g01359 | CX6g042465 | LOC_Os06g41880 | Os06g0624100 | - | Detail |
| C2H6g00747 | 6:22,061,584-22,067,112 | - | C1H6g00796 | - | - | - | - | Detail |
| C2H6g16937 | 6:22,072,841-22,075,445 | + | C1H6g18313 | CX6g041453 | LOC_Os06g41910 | Os06g0624700 | - | Detail |
| C2H6g18819 | 6:22,090,234-22,094,540 | + | C1H6g11989 | CX6g045135 | LOC_Os06g41930 | Os06g0624900 | - | Detail |
| C2H6g11568 | 6:22,109,151-22,110,388 | + | - | - | - | - | - | Detail |
| C2H6g28797 | 6:22,113,460-22,115,442 | + | C1H6g11677 | CX6g045536 | LOC_Os06g41980 | Os06g0625200 | - | Detail |
| C2H6g01537 | 6:22,115,534-22,125,784 | - | C1H6g13871 | CX6g045878 | LOC_Os06g41990 | Os06g0625400 | SPP | Detail |
| C2H6g02688 | 6:22,139,230-22,139,878 | + | C1H6g05053 | CX6g043302 | LOC_Os06g42020 | Os06g0625700 | OsCSLA9 | Detail |
| C2H6g09068 | 6:22,140,686-22,144,628 | + | C1H6g05053 | CX6g043302 | LOC_Os06g42020 | Os06g0625700 | OsCSLA9 | Detail |
| C2H6g22642 | 6:22,144,214-22,150,577 | - | C1H6g31374 | CX6g042213 | LOC_Os06g42030 | Os06g0625800 | - | Detail |
| C2H6g11680 | 6:22,172,783-22,174,774 | + | C1H6g23109 | CX6g045268 | - | - | - | Detail |
| C2H6g15686 | 6:22,220,512-22,222,055 | + | C1H6g09355 | CX6g045016 | LOC_Os06g42280 | Os06g0628032 | - | Detail |
| C2H6g14286 | 6:22,231,427-22,238,847 | - | C1H6g08901 | CX6g043658 | LOC_Os06g42310 | Os06g0628500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |