| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g06309 | 6:7,869,827-7,871,431 | - | C2H6g03633 | CX6g041297 | LOC_Os06g16170 | Os06g0272900 | OsXyBAT5 | Detail |
| C1H6g24810 | 6:7,881,763-7,884,113 | + | C2H6g10725 | CX6g044106 | LOC_Os06g16200 | Os06g0273200 | - | Detail |
| C1H6g17306 | 6:7,892,626-7,893,921 | + | C2H6g14556 | CX6g041716 | LOC_Os06g16240 | Os06g0273500 | OsXyBAT4 | Detail |
| C1H6g00477 | 6:7,910,915-7,915,749 | - | C2H6g20773 | CX6g044070 | LOC_Os06g16260 | Os06g0273800 | - | Detail |
| C1H6g08502 | 6:7,918,022-7,919,566 | + | C2H6g24601 | - | LOC_Os06g16270 | Os06g0274000 | OsHSBP2 | Detail |
| C1H6g27290 | 6:7,921,189-7,935,858 | - | C2H6g12328 | CX6g041389 | LOC_Os06g16280 | Os06g0274100 | - | Detail |
| C1H6g22454 | 6:7,937,891-7,939,984 | + | C2H6g29411 | CX6g041342 | LOC_Os06g16290 | Os06g0274200 | - | Detail |
| C1H6g18150 | 6:7,946,124-7,947,825 | + | C2H6g06933 | CX6g044242 | LOC_Os06g16300 | Os06g0274300 | - | Detail |
| C1H6g11842 | 6:7,958,402-7,966,238 | + | C2H6g23301 | CX6g042085 | LOC_Os06g16330 | Os06g0274500 | OsSERL2 | Detail |
| C1H6g22322 | 6:7,967,759-7,969,743 | - | C2H6g18739 | CX6g044203 | LOC_Os06g16350 | Os06g0274800 | - | Detail |
| C1H6g28161 | 6:7,974,302-7,977,091 | + | C2H6g26801 | CX6g043973 | LOC_Os06g16370 | Os06g0275000 | SE1, Se1(Lm, Lf, Rs, Fl), se(t), Hd1, HD1, Fl, Lm, Se1, K, Rs, Lf, Se-1, Hd1(t), qHD1(t), OsA, OsBBX18, Hd1/OsA, OsCCT21 | Detail |
| C1H6g25706 | 6:7,981,386-7,983,499 | - | C2H6g26383 | - | - | - | - | Detail |
| C1H6g22180 | 6:7,994,210-8,002,603 | + | C2H6g04388 | CX6g042350 | LOC_Os06g16390 | Os06g0275500 | CLF, OsSET24, SDG711, EZ1, OsCLF | Detail |
| C1H6g11424 | 6:8,004,198-8,015,424 | + | C2H6g05369 | CX6g043166 | LOC_Os06g16400 | Os06g0275600 | - | Detail |
| C1H6g04853 | 6:8,015,545-8,020,532 | - | C2H6g15127 | CX6g045943 | LOC_Os06g16410 | Os06g0275700 | - | Detail |
| C1H6g01958 | 6:8,035,270-8,038,178 | + | C2H6g23432 | CX6g044340 | LOC_Os06g16420 | Os06g0275800 | - | Detail |
| C1H6g15789 | 6:8,039,966-8,047,464 | + | C2H6g19168 | CX6g045397 | LOC_Os06g16430 | Os06g0275900 | - | Detail |
| C1H6g04878 | 6:8,178,268-8,180,849 | - | C2H6g13388 | CX6g042959 | LOC_Os06g16640 | Os06g0278000 | - | Detail |
| C1H6g18405 | 6:8,290,588-8,306,425 | - | C2H6g14158 | CX6g045347 | LOC_Os06g16980 | Os06g0281400 | - | Detail |
| C1H6g06414 | 6:8,307,246-8,307,530 | - | C2H6g29390 | CX6g042329 | LOC_Os06g16990 | Os06g0281550 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14413 | 4:7,286,481-7,290,468 | + | C1H4g06358 | CX4g036444 | LOC_Os04g15580 | Os04g0366000 | - | Detail |
| C2H4g27049 | 4:7,321,484-7,322,545 | - | C1H4g14603 | CX4g035385 | LOC_Os04g14340 | Os04g0220501 | - | Detail |
| C2H4g23666 | 4:7,329,569-7,332,067 | + | C1H4g16815 | - | - | - | - | Detail |
| C2H4g03840 | 4:7,335,245-7,335,691 | - | C1H4g12802 | CX4g035733 | LOC_Os04g14360 | Os04g0221000 | - | Detail |
| C2H4g23137 | 4:7,354,616-7,362,154 | - | C1H4g14486 | CX4g035733 | LOC_Os04g14410 | Os04g0221000 | - | Detail |
| C2H4g04277 | 4:7,366,046-7,368,782 | + | C1H4g17568 | - | LOC_Os04g14420 | - | - | Detail |
| C2H4g14084 | 4:7,374,155-7,378,486 | - | C1H4g30087 | CX4g033365 | LOC_Os04g14450 | Os04g0221300 | - | Detail |
| C2H4g04483 | 4:7,378,887-7,379,116 | - | - | - | - | - | - | Detail |
| C2H4g15681 | 4:7,400,720-7,410,837 | - | C1H4g20191 | CX4g036219 | LOC_Os04g14510 | Os04g0221600 | - | Detail |
| C2H4g16880 | 4:7,446,530-7,447,250 | - | C1H4g25587 | CX4g036574 | LOC_Os04g13640 | Os04g0213800 | - | Detail |
| C2H4g16558 | 4:7,447,876-7,453,313 | - | C1H4g27190 | CX4g031595 | LOC_Os04g14570 | Os04g0213800 | - | Detail |
| C2H4g15426 | 4:7,487,110-7,503,524 | - | C1H4g09121 | CX4g033711 | LOC_Os04g14654 | Os04g0223000 | - | Detail |
| C2H4g19689 | 4:7,509,814-7,512,457 | - | C1H4g19080 | CX4g031538 | LOC_Os04g14680 | Os04g0223300 | - | Detail |
| C2H4g12058 | 4:7,514,300-7,520,504 | - | C1H4g25173 | CX4g031401 | LOC_Os04g14690 | Os04g0223500 | - | Detail |
| C2H4g10349 | 4:7,539,965-7,545,169 | - | C1H4g16118 | CX4g035150 | LOC_Os04g14690 | Os04g0223901 | - | Detail |
| C2H4g14405 | 4:7,543,736-7,544,182 | + | - | - | - | Os04g0224000 | - | Detail |
| C2H4g13050 | 4:7,552,178-7,555,311 | - | C1H4g31119 | CX4g032865 | LOC_Os11g41400 | - | - | Detail |
| C2H4g13102 | 4:7,571,830-7,574,721 | - | C1H4g31787 | - | - | - | - | Detail |
| C2H4g12943 | 4:7,580,866-7,585,679 | - | C1H4g10957 | CX4g031570 | LOC_Os04g14760 | Os04g0224600 | - | Detail |
| C2H4g19938 | 4:7,600,145-7,607,074 | - | C1H4g03285 | CX4g035046 | LOC_Os04g14790 | Os04g0224900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |