| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g22632 | 6:6,992,748-6,993,285 | - | C2H6g13635 | - | - | - | - | Detail |
| C1H6g03516 | 6:7,001,027-7,004,013 | - | C2H6g13116 | - | LOC_Os06g14370 | Os06g0254700 | OsPXG9 | Detail |
| C1H6g28992 | 6:7,015,382-7,018,554 | - | C2H6g19957 | CX6g043149 | LOC_Os06g14390 | Os06g0255100 | - | Detail |
| C1H6g26804 | 6:7,022,245-7,025,730 | - | C2H6g03905 | CX6g043149 | LOC_Os06g14400 | Os06g0255100 | - | Detail |
| C1H6g22472 | 6:7,027,157-7,033,849 | + | C2H6g18557 | CX6g045289 | LOC_Os06g14406 | Os06g0255200 | OsSYD | Detail |
| C1H6g17385 | 6:7,035,172-7,050,649 | + | C2H6g03506 | CX6g045289 | LOC_Os06g08480 | Os06g0183800 | OsCHR702, CHR702 | Detail |
| C1H6g25665 | 6:7,077,099-7,084,231 | + | C2H6g01568 | CX6g041419 | LOC_Os06g14440 | Os06g0255700 | OsCHR737, CHR737 | Detail |
| C1H6g14213 | 6:7,097,208-7,101,149 | + | C2H6g09378 | CX6g041799 | LOC_Os06g14450 | Os06g0255900 | - | Detail |
| C1H6g06131 | 6:7,104,065-7,104,463 | + | C2H6g19888 | - | - | Os01g0860700 | - | Detail |
| C1H6g16713 | 6:7,105,606-7,111,284 | + | C2H6g20704 | CX6g043274 | LOC_Os06g14460 | Os06g0256000 | - | Detail |
| C1H6g18186 | 6:7,111,499-7,115,365 | - | C2H6g16008 | CX6g044029 | LOC_Os06g14470 | Os06g0256200 | - | Detail |
| C1H6g11927 | 6:7,120,893-7,124,868 | + | C2H6g20156 | CX6g044791 | LOC_Os06g14490 | Os06g0256300 | - | Detail |
| C1H6g01800 | 6:7,127,532-7,135,095 | + | C2H6g26974 | CX6g044161 | LOC_Os06g14510 | Os06g0256500 | - | Detail |
| C1H6g09434 | 6:7,150,132-7,150,921 | + | C2H6g13880 | CX6g041641 | LOC_Os06g14530 | Os06g0256800 | - | Detail |
| C1H6g06821 | 6:7,152,869-7,157,983 | - | C2H6g23574 | CX6g042391 | LOC_Os06g14540 | Os06g0256900 | OsGH9B3 | Detail |
| C1H6g28420 | 6:7,168,474-7,171,625 | - | C2H6g22071 | CX6g045791 | LOC_Os06g14550 | Os06g0257200 | - | Detail |
| C1H6g02316 | 6:7,181,278-7,182,825 | + | C2H6g04113 | CX6g044724 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| C1H6g09969 | 6:7,201,013-7,202,059 | + | C2H6g00648 | CX6g043290 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| C1H6g23895 | 6:7,244,709-7,245,212 | + | C2H6g21355 | CX6g042386 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| C1H6g21869 | 6:7,252,479-7,252,982 | + | C2H6g21355 | CX6g042613 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g17442 | 2:18,422,524-18,423,238 | - | C1H2g29093 | CX2g019839 | LOC_Os02g32580 | Os02g0527200 | - | Detail |
| C2H2g30266 | 2:18,428,074-18,431,227 | - | C1H2g07585 | CX2g022921 | LOC_Os02g32590 | Os02g0527300 | - | Detail |
| C2H2g23334 | 2:18,450,154-18,456,741 | - | C1H2g23562 | CX2g019234 | LOC_Os02g32610 | Os02g0527600 | OsCTR2 | Detail |
| C2H2g00546 | 2:18,457,858-18,459,252 | - | C1H2g04626 | CX2g022229 | - | Os02g0204700 | - | Detail |
| C2H2g10408 | 2:18,468,267-18,470,474 | - | C1H2g07463 | - | - | - | - | Detail |
| C2H2g01475 | 2:18,475,392-18,479,377 | - | C1H2g27676 | CX2g023161 | LOC_Os02g33720 | Os02g0528000 | - | Detail |
| C2H2g30277 | 2:18,481,189-18,483,386 | - | C1H2g02493 | CX2g019088 | LOC_Os02g32650 | Os02g0528100 | - | Detail |
| C2H2g20323 | 2:18,485,079-18,498,127 | - | C1H2g15691 | CX2g022806 | LOC_Os02g32660 | Os02g0528200 | SBE3, SBEIII*, SBEIII, Sbe3, RBE3, QEIIa, QEIIA, BEIIb, BEIIB, SBEIIb, OsBEIIb, sbe3, SBE III | Detail |
| C2H2g15285 | 2:18,508,480-18,520,543 | - | C1H2g29366 | CX2g020306 | LOC_Os02g32690 | Os02g0528900 | - | Detail |
| C2H2g20296 | 2:18,521,354-18,525,604 | - | C1H2g11870 | CX2g020568 | LOC_Os02g25600 | Os01g0134200 | - | Detail |
| C2H2g10414 | 2:18,537,876-18,542,501 | + | C1H2g00920 | CX2g022433 | LOC_Os02g32730 | Os02g0529400 | - | Detail |
| C2H2g18145 | 2:18,544,234-18,545,939 | + | C1H2g24766 | CX2g020157 | LOC_Os02g32740 | Os02g0529500 | - | Detail |
| C2H2g17400 | 2:18,555,495-18,556,987 | - | C1H2g22581 | CX2g023637 | LOC_Os02g32760 | Os02g0529700 | - | Detail |
| C2H2g26264 | 2:18,558,526-18,562,569 | - | C1H2g07352 | CX2g021706 | LOC_Os02g32770 | Os02g0529800 | - | Detail |
| C2H2g27061 | 2:18,573,076-18,574,369 | - | C1H2g17686 | CX2g021636 | LOC_Os02g32814 | Os02g0530100 | - | Detail |
| C2H2g20227 | 2:18,576,176-18,580,750 | + | C1H2g28782 | - | - | - | - | Detail |
| C2H2g28791 | 2:18,605,539-18,605,808 | + | C1H2g03635 | CX2g021909 | LOC_Os02g32850 | Os02g0530500 | - | Detail |
| C2H2g06644 | 2:18,610,359-18,615,965 | - | C1H2g17644 | CX2g021102 | LOC_Os02g32860 | Os02g0530600 | - | Detail |
| C2H2g13474 | 2:18,621,434-18,629,042 | + | C1H2g20262 | CX2g023644 | LOC_Os02g32930 | Os02g0531200 | - | Detail |
| C2H2g09518 | 2:18,638,699-18,639,867 | - | C1H2g17709 | CX2g023678 | LOC_Os02g32950 | Os02g0531600 | RCN2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |