| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01190 | 1:24,984,174-24,987,077 | + | C2H1g15446 | CX1g006805 | LOC_Os01g48930 | Os01g0681600 | - | Detail |
| C1H1g12744 | 1:24,995,411-25,007,176 | - | C2H1g14692 | CX1g000610 | LOC_Os01g48960 | Os01g0681900 | OsGOGAT1, NADH-GOGAT1 | Detail |
| C1H1g07001 | 1:25,023,129-25,028,085 | - | C2H1g11093 | CX1g000049 | LOC_Os01g48980 | Os01g0682200 | - | Detail |
| C1H1g06026 | 1:25,030,417-25,034,298 | + | C2H1g19818 | CX1g000149 | LOC_Os01g48990 | Os01g0682500 | - | Detail |
| C1H1g18921 | 1:25,034,677-25,041,336 | + | C2H1g30064 | CX1g000149 | LOC_Os01g49000 | Os01g0683100 | - | Detail |
| C1H1g07773 | 1:25,064,944-25,068,750 | + | C2H1g03389 | - | LOC_Os01g49010 | Os01g0683400 | OsORC4 | Detail |
| C1H1g21597 | 1:25,068,927-25,076,322 | - | C2H1g19532 | CX5g038117 | LOC_Os01g49024 | Os01g0683550 | - | Detail |
| C1H1g21001 | 1:25,078,174-25,080,264 | + | C2H1g08995 | CX1g002822 | LOC_Os01g49026 | Os01g0683600 | - | Detail |
| C1H1g08336 | 1:25,081,353-25,082,226 | + | C2H1g03855 | CX1g003922 | LOC_Os01g49030 | Os01g0683700 | - | Detail |
| C1H1g07796 | 1:25,123,183-25,126,721 | + | C2H1g15370 | CX1g000472 | LOC_Os01g49060 | Os01g0684800 | - | Detail |
| C1H1g29982 | 1:25,127,179-25,130,561 | - | C2H1g12213 | CX1g001799 | LOC_Os01g49120 | Os01g0684900 | - | Detail |
| C1H1g28582 | 1:25,133,148-25,133,829 | + | - | CX1g003066 | LOC_Os01g45100 | Os01g0117000 | - | Detail |
| C1H1g11448 | 1:25,135,044-25,138,407 | - | C2H1g09209 | CX1g003730 | LOC_Os01g49150 | Os01g0685200 | - | Detail |
| C1H1g30171 | 1:25,141,963-25,143,113 | + | C2H1g29921 | CX1g007197 | LOC_Os01g49160 | Os01g0685400 | RGN1 | Detail |
| C1H1g13712 | 1:25,153,436-25,164,749 | - | C2H1g15034 | CX1g004222 | LOC_Os01g49180 | Os01g0685500 | - | Detail |
| C1H1g18062 | 1:25,169,415-25,173,735 | + | C2H1g05241 | CX1g004551 | LOC_Os01g49190 | Os01g0685800 | - | Detail |
| C1H1g18271 | 1:25,174,806-25,179,342 | + | C2H1g18560 | CX1g003807 | LOC_Os01g49200 | Os01g0685900 | - | Detail |
| C1H1g07342 | 1:25,187,753-25,190,296 | + | C2H1g28047 | CX1g002173 | LOC_Os01g49230 | Os01g0686200 | - | Detail |
| C1H1g14493 | 1:25,192,483-25,193,901 | + | C2H1g26387 | CX1g002143 | LOC_Os01g49240 | Os01g0686300 | - | Detail |
| C1H1g17022 | 1:25,197,386-25,202,413 | + | C2H1g21728 | CX1g000503 | LOC_Os01g49250 | Os01g0686400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g07958 | 11:2,753,730-2,754,542 | + | C1H11g01257 | CX11g011738 | LOC_Os11g06780 | Os11g0108800 | - | Detail |
| C2H11g12906 | 11:2,755,645-2,755,995 | + | C1H11g01257 | CX11g014975 | LOC_Os11g06780 | Os11g0168600 | OsRLCK311 | Detail |
| C2H11g06867 | 11:2,769,312-2,775,663 | + | C1H11g25541 | CX11g012040 | LOC_Os11g06810 | Os11g0169100 | - | Detail |
| C2H11g18204 | 11:2,779,464-2,781,421 | - | C1H11g31699 | CX11g012381 | LOC_Os11g06820 | Os11g0169200 | OsAUX5 | Detail |
| C2H11g02739 | 11:2,792,567-2,794,068 | + | C1H11g29597 | - | LOC_Os11g06840 | Os11g0169400 | - | Detail |
| C2H11g17011 | 11:2,794,520-2,794,768 | + | C1H11g29597 | - | LOC_Os11g06840 | Os11g0169400 | - | Detail |
| C2H11g17775 | 11:2,802,568-2,803,854 | - | C1H11g23066 | CX11g011604 | LOC_Os11g06860 | Os11g0169600 | - | Detail |
| C2H11g15019 | 11:2,804,121-2,805,845 | - | C1H11g21063 | CX11g014813 | LOC_Os11g06870 | Os11g0169700 | - | Detail |
| C2H11g25500 | 11:2,807,900-2,813,610 | + | C1H11g28306 | CX11g011307 | LOC_Os11g06880 | Os11g0169800 | - | Detail |
| C2H11g21238 | 11:2,814,122-2,816,080 | - | C1H11g24754 | CX11g012521 | LOC_Os11g06890 | Os11g0169900 | - | Detail |
| C2H11g01682 | 11:2,818,987-2,835,174 | - | C1H11g03754 | CX11g013642 | LOC_Os11g06910 | Os11g0170200 | - | Detail |
| C2H11g02083 | 11:2,842,450-2,847,861 | - | C1H11g19710 | CX11g012261 | LOC_Os11g06930 | Os11g0170300 | - | Detail |
| C2H11g14668 | 11:2,852,155-2,854,707 | - | C1H11g00486 | CX11g014717 | LOC_Os11g06990 | Os11g0171100 | - | Detail |
| C2H11g20177 | 11:2,876,127-2,878,964 | + | C1H11g02887 | CX11g010973 | LOC_Os11g07000 | Os11g0171100 | - | Detail |
| C2H11g20553 | 11:2,888,533-2,891,618 | - | C1H11g21973 | CX11g011009 | LOC_Os11g07020 | Os11g0171300 | - | Detail |
| C2H11g00926 | 11:2,893,288-2,894,751 | - | C1H11g09155 | CX11g012638 | LOC_Os11g07030 | Os11g0171400 | - | Detail |
| C2H11g09510 | 11:2,895,053-2,899,950 | - | C1H11g09618 | CX11g013844 | LOC_Os11g07040 | Os11g0171500 | CDPK24, OsCDPK14, OsCPK24 | Detail |
| C2H11g07786 | 11:2,907,554-2,913,457 | - | C1H11g05971 | CX11g011467 | LOC_Os11g07050 | Os11g0171700 | - | Detail |
| C2H11g16481 | 11:2,923,767-2,928,217 | + | C1H11g24257 | CX11g012659 | LOC_Os11g07060 | Os11g0171800 | - | Detail |
| C2H11g17291 | 11:2,933,592-2,935,190 | + | C1H11g07858 | CX11g014246 | LOC_Os11g07090 | Os11g0172100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |