| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g11372 | 6:5,106,515-5,112,265 | - | C2H6g18048 | CX6g045112 | LOC_Os06g11320 | Os06g0216800 | - | Detail |
| C1H6g00888 | 6:5,124,141-5,138,951 | - | C2H6g03789 | CX6g041344 | LOC_Os06g11330 | Os06g0217300 | OsMADS55 | Detail |
| C1H6g18685 | 6:5,152,665-5,155,682 | - | C2H6g23128 | CX6g045941 | LOC_Os06g11370 | Os06g0217500 | - | Detail |
| C1H6g24377 | 6:5,158,502-5,174,889 | - | C2H6g26845 | CX6g045380 | LOC_Os06g11380 | Os06g0217600 | - | Detail |
| C1H6g12848 | 6:5,180,504-5,182,693 | - | C2H6g14795 | CX6g044036 | LOC_Os06g11400 | Os06g0217700 | - | Detail |
| C1H6g13809 | 6:5,194,754-5,196,441 | + | C2H6g01224 | CX6g045086 | LOC_Os06g11410 | Os06g0217900 | - | Detail |
| C1H6g21444 | 6:5,207,673-5,210,294 | + | C2H6g05678 | CX6g042909 | LOC_Os06g11430 | Os06g0218100 | - | Detail |
| C1H6g24569 | 6:5,212,059-5,218,518 | - | C2H6g22208 | CX6g042409 | LOC_Os06g11440 | Os06g0116800 | - | Detail |
| C1H6g18324 | 6:5,219,309-5,221,083 | - | - | - | - | Os06g0218150 | - | Detail |
| C1H6g03515 | 6:5,244,616-5,245,596 | + | C2H6g20176 | CX6g045174 | LOC_Os06g11490 | Os06g0218600 | - | Detail |
| C1H6g30313 | 6:5,246,901-5,255,390 | - | C2H6g07612 | CX6g044207 | LOC_Os06g11500 | Os06g0218500 | - | Detail |
| C1H6g10650 | 6:5,261,285-5,268,909 | - | C2H6g07126 | CX6g044149 | LOC_Os06g11520 | Os06g0218900 | - | Detail |
| C1H6g08240 | 6:5,277,297-5,281,555 | + | C2H6g01223 | CX6g043370 | LOC_Os06g11600 | Os06g0219400 | - | Detail |
| C1H6g20600 | 6:5,282,736-5,283,610 | - | C2H6g05696 | CX6g045423 | LOC_Os06g11610 | Os06g0219500 | - | Detail |
| C1H6g16726 | 6:5,284,360-5,284,792 | - | C2H6g05696 | - | - | - | - | Detail |
| C1H6g25178 | 6:5,287,114-5,290,789 | + | C2H6g19113 | CX6g043205 | LOC_Os06g11620 | Os06g0219600 | - | Detail |
| C1H6g15697 | 6:5,291,704-5,294,095 | - | C2H6g28746 | CX6g042726 | LOC_Os06g11630 | Os06g0219700 | - | Detail |
| C1H6g18914 | 6:5,303,979-5,309,020 | - | C2H6g03151 | CX6g045973 | LOC_Os06g11640 | Os06g0219800 | - | Detail |
| C1H6g08532 | 6:5,340,533-5,341,081 | + | C2H6g24300 | CX6g045266 | LOC_Os06g11720 | Os06g0220500 | - | Detail |
| C1H6g03579 | 6:5,341,180-5,342,130 | + | C2H6g24300 | CX6g045266 | LOC_Os06g11720 | Os06g0220500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08416 | 1:27,925,685-27,929,922 | + | C1H1g06199 | CX1g005528 | LOC_Os01g54515 | Os01g0748950 | OsNPF4.5 | Detail |
| C2H1g22814 | 1:27,930,437-27,931,290 | + | C1H1g21519 | CX1g000885 | LOC_Os01g54520 | Os01g0749000 | - | Detail |
| C2H1g20660 | 1:27,932,265-27,934,722 | + | C1H1g06931 | CX1g004193 | LOC_Os01g54530 | Os01g0749100 | - | Detail |
| C2H1g21635 | 1:27,935,519-27,937,890 | + | C1H1g02075 | CX1g000277 | LOC_Os01g54540 | Os01g0749200 | WLP1, cp rpl13, cp RPL13 | Detail |
| C2H1g02265 | 1:27,938,809-27,941,059 | + | C1H1g00896 | CX1g005465 | LOC_Os01g54550 | Os01g0749300 | HSFA4A, OsHsfA4a, OsHsfA4b, OsHsf-04, HSFA4B, HSF04, OsHSF9, RHSF9, HSF9 | Detail |
| C2H1g14114 | 1:27,942,037-27,946,129 | - | C1H1g09179 | CX1g003457 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| C2H1g10922 | 1:27,965,504-27,970,673 | + | C1H1g19262 | CX1g003630 | LOC_Os01g54580 | Os01g0749900 | - | Detail |
| C2H1g29233 | 1:27,974,220-27,977,908 | + | C1H1g17809 | CX1g000465 | LOC_Os01g54590 | Os01g0750000 | - | Detail |
| C2H1g09211 | 1:27,980,401-27,982,082 | - | C1H1g24495 | CX1g004996 | LOC_Os01g54600 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g25863 | 1:27,992,124-27,997,821 | + | C1H1g00277 | CX1g006527 | LOC_Os01g54620 | Os01g0750300 | - | Detail |
| C2H1g29243 | 1:28,006,149-28,009,921 | - | C1H1g12537 | - | LOC_Os01g54670 | Os01g0750500 | - | Detail |
| C2H1g03544 | 1:28,014,717-28,018,126 | - | C1H1g02730 | CX1g001248 | LOC_Os01g54700 | Os01g0750600 | - | Detail |
| C2H1g05225 | 1:28,029,339-28,029,912 | - | C1H1g08638 | CX1g000813 | LOC_Os01g53140 | Os01g0750800 | - | Detail |
| C2H1g04914 | 1:28,043,850-28,051,886 | + | C1H1g18828 | CX1g006345 | LOC_Os01g54784 | Os01g0751300 | - | Detail |
| C2H1g10063 | 1:28,056,456-28,059,326 | - | C1H1g01340 | CX1g003213 | LOC_Os01g54810 | Os01g0751600 | THIS1, This1 | Detail |
| C2H1g08663 | 1:28,061,852-28,063,890 | + | C1H1g28508 | CX1g001241 | LOC_Os01g54850 | Os01g0752100 | - | Detail |
| C2H1g27818 | 1:28,064,022-28,068,139 | - | C1H1g19975 | CX1g002849 | LOC_Os01g54860 | Os01g0752200 | NOG1 | Detail |
| C2H1g21432 | 1:28,070,490-28,072,113 | - | C1H1g04449 | CX1g004206 | LOC_Os01g54870 | Os01g0752300 | - | Detail |
| C2H1g04122 | 1:28,073,615-28,076,043 | - | C1H1g25368 | CX1g006705 | LOC_Os01g54880 | Os01g0752400 | - | Detail |
| C2H1g02082 | 1:28,080,846-28,086,760 | - | C1H1g06182 | CX1g007206 | LOC_Os01g54900 | Os01g0752600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |