| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g16649 | 6:4,921,476-4,923,239 | - | C2H6g13451 | CX6g041856 | LOC_Os06g10990 | Os06g0212900 | - | Detail |
| C1H6g08719 | 6:4,934,018-4,935,004 | - | C2H6g17342 | CX6g044769 | - | - | - | Detail |
| C1H6g08802 | 6:4,941,817-4,945,550 | - | C2H6g15327 | CX6g043284 | LOC_Os06g11020 | Os06g0213200 | - | Detail |
| C1H6g26256 | 6:4,952,637-4,957,436 | - | C2H6g18821 | CX6g045440 | LOC_Os06g11040 | Os06g0213400 | - | Detail |
| C1H6g28407 | 6:4,959,925-4,965,187 | - | C2H6g21056 | CX6g042016 | LOC_Os06g11050 | Os06g0111800 | - | Detail |
| C1H6g27911 | 6:4,971,648-4,974,974 | + | C2H6g04205 | CX6g043031 | LOC_Os06g11070 | Os06g0214100 | - | Detail |
| C1H6g25394 | 6:5,009,783-5,016,895 | - | C2H6g24676 | CX6g045602 | LOC_Os06g11135 | Os06g0214900 | - | Detail |
| C1H6g15327 | 6:5,028,784-5,032,414 | - | C2H6g13237 | CX6g041644 | LOC_Os06g11170 | Os06g0215200 | - | Detail |
| C1H6g11886 | 6:5,033,363-5,040,961 | - | C2H6g12848 | CX6g041530 | LOC_Os06g11180 | Os06g0215300 | - | Detail |
| C1H6g04214 | 6:5,041,314-5,048,849 | - | C2H6g10401 | CX6g041872 | LOC_Os06g11190 | Os06g0215400 | - | Detail |
| C1H6g07641 | 6:5,050,969-5,052,300 | - | C2H6g08264 | - | LOC_Os06g11200 | Os06g0215500 | - | Detail |
| C1H6g30460 | 6:5,053,733-5,055,213 | - | C2H6g08264 | - | LOC_Os06g11210 | Os06g0215600 | - | Detail |
| C1H6g06300 | 6:5,059,616-5,063,488 | - | C2H6g15879 | - | LOC_Os06g11240 | Os06g0215900 | - | Detail |
| C1H6g29115 | 6:5,065,434-5,066,899 | - | C2H6g01602 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C1H6g06799 | 6:5,068,541-5,070,535 | - | C2H6g19562 | CX6g042936 | LOC_Os06g11270 | Os06g0216100 | - | Detail |
| C1H6g23925 | 6:5,072,857-5,074,115 | - | C2H6g11179 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C1H6g31851 | 6:5,080,585-5,081,840 | - | C2H6g11179 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C1H6g15300 | 6:5,084,901-5,090,939 | - | C2H6g01468 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C1H6g13881 | 6:5,092,913-5,094,429 | - | C2H6g04782 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C1H6g13647 | 6:5,103,883-5,104,770 | - | C2H6g21771 | CX6g041766 | LOC_Os06g11310 | Os06g0216700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g19834 | 2:25,897,490-25,898,188 | + | C1H2g17371 | CX2g019917 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| C2H2g12350 | 2:25,906,290-25,907,369 | - | C1H2g00614 | CX2g020719 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| C2H2g27051 | 2:25,916,250-25,919,973 | - | C1H2g03932 | CX2g020860 | LOC_Os02g45910 | Os02g0684150 | OsDNA2_15 | Detail |
| C2H2g04078 | 2:25,923,590-25,928,192 | + | C1H2g09273 | CX2g021780 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| C2H2g07890 | 2:25,928,444-25,929,087 | - | C1H2g23248 | CX2g023573 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| C2H2g23208 | 2:25,933,967-25,934,278 | - | C1H2g07518 | CX2g023547 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| C2H2g03417 | 2:25,934,838-25,937,935 | + | C1H2g17890 | CX2g023866 | LOC_Os02g45950 | Os02g0684600 | - | Detail |
| C2H2g24497 | 2:25,938,557-25,939,423 | + | C1H2g27881 | CX2g019320 | - | - | - | Detail |
| C2H2g17403 | 2:25,946,401-25,952,525 | + | C1H2g27343 | CX2g023375 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| C2H2g16948 | 2:25,953,171-25,953,797 | + | - | - | - | - | - | Detail |
| C2H2g07817 | 2:25,957,041-25,957,384 | + | C1H2g11465 | CX7g047983 | - | Os02g0117400 | - | Detail |
| C2H2g27686 | 2:25,963,024-25,965,649 | - | C1H2g24305 | CX2g019726 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| C2H2g27892 | 2:25,976,877-25,979,425 | - | C1H2g27920 | CX2g023473 | LOC_Os02g46080 | Os02g0685600 | - | Detail |
| C2H2g03411 | 2:25,981,902-25,987,049 | + | C1H2g28250 | CX2g020113 | LOC_Os02g46090 | Os02g0685900 | OsCPK5 | Detail |
| C2H2g19134 | 2:25,991,362-25,991,931 | - | C1H2g26668 | CX2g020098 | LOC_Os02g46100 | Os02g0686100 | OsATL32 | Detail |
| C2H2g06457 | 2:25,999,464-26,003,538 | - | C1H2g04547 | CX2g020840 | LOC_Os02g46120 | Os02g0686300 | - | Detail |
| C2H2g09278 | 2:26,003,711-26,008,957 | + | C1H2g29736 | CX2g022035 | LOC_Os02g46130 | Os02g0686400 | - | Detail |
| C2H2g01630 | 2:26,011,921-26,012,752 | + | C1H2g13130 | CX2g023233 | LOC_Os02g46140 | Os02g0686500 | - | Detail |
| C2H2g28721 | 2:26,013,006-26,017,407 | - | C1H2g25245 | CX2g022938 | LOC_Os02g46150 | Os02g0686600 | - | Detail |
| C2H2g18789 | 2:26,024,379-26,024,747 | - | C1H2g26309 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |