| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g24925 | 6:4,712,731-4,719,622 | - | C2H6g01432 | CX6g042180 | LOC_Os06g10620 | Os06g0208300 | OsSPT5-1 | Detail |
| C1H6g14849 | 6:4,747,933-4,751,641 | + | C2H6g17419 | CX6g043421 | LOC_Os06g10650 | Os06g0208700 | - | Detail |
| C1H6g23556 | 6:4,752,803-4,755,833 | + | C2H6g13350 | CX6g043324 | LOC_Os06g10660 | Os06g0208800 | LYP6, Os-LYP6, OsLYP6 | Detail |
| C1H6g29444 | 6:4,768,715-4,778,054 | - | C2H6g18588 | CX6g043196 | LOC_Os06g10690 | Os06g0209300 | - | Detail |
| C1H6g09344 | 6:4,800,084-4,803,044 | + | C2H6g20741 | CX6g045030 | LOC_Os06g10750 | Os06g0210000 | - | Detail |
| C1H6g15422 | 6:4,805,226-4,807,782 | + | C2H6g09939 | CX6g044963 | LOC_Os06g10760 | Os06g0210100 | - | Detail |
| C1H6g05633 | 6:4,808,039-4,811,774 | + | C2H6g00045 | CX6g041985 | LOC_Os06g10770 | Os06g0210200 | - | Detail |
| C1H6g15742 | 6:4,823,929-4,824,483 | + | C2H6g14969 | CX6g042263 | - | - | - | Detail |
| C1H6g28588 | 6:4,825,504-4,828,866 | + | C2H6g14969 | CX6g042263 | LOC_Os06g10810 | Os06g0210500 | OsMPT3;2 | Detail |
| C1H6g13425 | 6:4,846,067-4,850,278 | + | C2H6g23532 | CX6g043349 | LOC_Os06g10850 | Os06g0210900 | - | Detail |
| C1H6g17556 | 6:4,850,937-4,852,208 | + | C2H6g27273 | CX6g042936 | LOC_Os06g10860 | Os06g0137650 | - | Detail |
| C1H6g02776 | 6:4,864,551-4,868,839 | + | C2H6g15173 | CX6g045664 | LOC_Os06g10880 | Os06g0211200 | - | Detail |
| C1H6g25517 | 6:4,872,283-4,873,223 | + | C2H6g18394 | CX6g044980 | LOC_Os06g10890 | Os06g0211300 | - | Detail |
| C1H6g00811 | 6:4,882,238-4,886,129 | + | C2H6g21021 | CX6g042836 | LOC_Os06g10910 | Os06g0211600 | - | Detail |
| C1H6g22671 | 6:4,886,598-4,888,923 | - | C2H6g06161 | CX6g042891 | LOC_Os06g10920 | Os06g0211700 | - | Detail |
| C1H6g03132 | 6:4,891,223-4,893,482 | - | C2H6g26839 | CX6g041606 | LOC_Os06g10930 | Os06g0212100 | - | Detail |
| C1H6g29058 | 6:4,896,978-4,898,934 | - | C2H6g02416 | CX6g042836 | LOC_Os06g10950 | Os06g0212300 | - | Detail |
| C1H6g18714 | 6:4,900,078-4,901,428 | + | C2H6g04278 | - | - | - | - | Detail |
| C1H6g31434 | 6:4,905,603-4,907,355 | + | C2H6g07380 | CX6g042836 | LOC_Os06g10960 | Os06g0212400 | - | Detail |
| C1H6g03503 | 6:4,912,182-4,913,976 | + | C2H6g03944 | CX6g042836 | LOC_Os06g10970 | Os06g0212500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g10310 | 3:10,894,128-10,896,740 | + | C1H3g27306 | CX3g030007 | LOC_Os03g21450 | Os03g0130800 | - | Detail |
| C2H3g17481 | 3:10,896,805-10,900,686 | - | C1H3g15898 | CX3g028069 | LOC_Os03g21460 | Os03g0332400 | GLYII-2, OsGLYII2, GLYII2, OsGLYII-2 | Detail |
| C2H3g22879 | 3:10,904,923-10,906,403 | - | C1H3g21366 | CX3g029311 | LOC_Os11g11390 | Os03g0332500 | - | Detail |
| C2H3g01804 | 3:10,908,596-10,910,611 | - | C1H3g21148 | CX3g027147 | LOC_Os03g21480 | Os03g0332533 | - | Detail |
| C2H3g10583 | 3:10,913,454-10,917,924 | - | C1H3g11764 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C2H3g24190 | 3:10,924,413-10,929,402 | + | C1H3g02450 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C2H3g30311 | 3:10,929,734-10,935,090 | - | C1H3g13994 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C2H3g26938 | 3:10,935,271-10,945,526 | + | C1H3g12459 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C2H3g19269 | 3:10,946,787-10,949,471 | + | C1H3g29664 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C2H3g24047 | 3:10,953,705-10,958,206 | + | C1H3g30788 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C2H3g24886 | 3:10,958,751-10,959,254 | + | C1H3g06087 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C2H3g01911 | 3:10,962,059-10,966,029 | - | C1H3g12764 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C2H3g06072 | 3:10,971,787-10,975,855 | + | C1H3g24732 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C2H3g19486 | 3:10,977,888-10,981,311 | + | C1H3g12242 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C2H3g01471 | 3:10,981,968-10,982,447 | - | C1H3g12872 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C2H3g23114 | 3:10,988,613-10,995,631 | + | C1H3g04089 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C2H3g29675 | 3:10,995,715-11,000,869 | - | C1H3g19863 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C2H3g22866 | 3:11,003,512-11,004,783 | + | C1H3g05344 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C2H3g03886 | 3:11,009,746-11,011,541 | + | C1H3g04080 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C2H3g08004 | 3:11,015,360-11,015,605 | + | C1H3g16339 | CX3g030092 | - | Os07g0676800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |