| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22731 | 1:24,806,899-24,821,417 | - | C2H1g03816 | CX1g004904 | LOC_Os01g48680 | Os01g0678500 | TPC1, OsTPC1, Tpc1, OsCC1 | Detail |
| C1H1g06484 | 1:24,822,645-24,824,648 | + | C2H1g17432 | CX1g001832 | LOC_Os01g48690 | Os01g0678600 | - | Detail |
| C1H1g21202 | 1:24,825,534-24,828,516 | - | C2H1g29587 | CX1g005378 | LOC_Os01g48700 | Os01g0678700 | - | Detail |
| C1H1g29809 | 1:24,831,421-24,834,882 | + | C2H1g22453 | CX1g000800 | - | - | - | Detail |
| C1H1g09148 | 1:24,836,776-24,837,408 | - | C2H1g18621 | CX1g006182 | LOC_Os01g48710 | Os01g0678800 | - | Detail |
| C1H1g01369 | 1:24,845,874-24,854,466 | + | C2H1g02873 | CX1g006519 | LOC_Os01g48720 | Os01g0679000 | - | Detail |
| C1H1g15834 | 1:24,862,555-24,939,365 | - | C2H1g22016 | CX1g002522 | LOC_Os01g48830 | Os01g0680700 | - | Detail |
| C1H1g09308 | 1:24,863,371-24,867,936 | + | C2H1g10975 | CX1g004313 | LOC_Os01g48750 | Os01g0679550 | - | Detail |
| C1H1g00895 | 1:24,869,571-24,872,932 | + | C2H1g25010 | CX1g003619 | LOC_Os01g48760 | Os01g0679600 | - | Detail |
| C1H1g15404 | 1:24,886,940-24,893,719 | + | C2H1g01242 | CX1g003718 | LOC_Os01g48790 | Os01g0679900 | - | Detail |
| C1H1g14743 | 1:24,904,493-24,905,653 | + | C2H1g18628 | CX1g004327 | LOC_Os01g48800 | Os01g0680200 | OsPUP4, BG3/OsPUP4, BG3 | Detail |
| C1H1g08166 | 1:24,917,950-24,920,122 | + | C2H1g09841 | CX1g006918 | LOC_Os01g48810 | Os01g0680400 | - | Detail |
| C1H1g07424 | 1:24,925,640-24,926,551 | + | C2H1g14175 | CX1g002655 | LOC_Os01g48820 | Os01g0680600 | - | Detail |
| C1H1g07492 | 1:24,931,644-24,932,133 | + | - | - | - | Os01g0680650 | - | Detail |
| C1H1g17992 | 1:24,948,315-24,950,911 | - | C2H1g29263 | CX1g007143 | LOC_Os01g48850 | Os01g0680900 | - | Detail |
| C1H1g20689 | 1:24,952,547-24,958,250 | - | C2H1g05013 | CX1g002388 | LOC_Os01g48874 | Os01g0681000 | - | Detail |
| C1H1g14533 | 1:24,963,599-24,966,274 | + | C2H1g17133 | CX1g001461 | LOC_Os01g48900 | Os01g0681100 | - | Detail |
| C1H1g07251 | 1:24,966,702-24,969,016 | + | C2H1g07127 | CX1g001461 | LOC_Os01g48900 | Os05g0556100 | - | Detail |
| C1H1g21340 | 1:24,970,459-24,975,608 | - | C2H1g13127 | CX1g007055 | LOC_Os01g48910 | Os01g0681200 | - | Detail |
| C1H1g18369 | 1:24,978,777-24,984,105 | - | C2H1g29187 | CX1g000478 | LOC_Os01g48920 | Os01g0681400 | ATG6A, OsATG6a | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g09517 | 8:933,095-941,648 | - | C1H8g02578 | CX8g054680 | LOC_Os08g02354 | Os08g0116700 | - | Detail |
| C2H8g11779 | 8:942,905-946,084 | - | C1H8g22854 | CX8g053968 | LOC_Os08g02360 | Os08g0116800 | - | Detail |
| C2H8g09255 | 8:946,767-950,084 | - | C1H8g13803 | CX8g050705 | LOC_Os08g02370 | Os08g0116900 | - | Detail |
| C2H8g21582 | 8:955,603-959,082 | + | C1H8g11694 | CX8g054484 | LOC_Os08g02380 | Os08g0117000 | PSS1, pss1 | Detail |
| C2H8g21750 | 8:962,197-964,236 | + | C1H8g10526 | CX8g053547 | LOC_Os08g02390 | Os08g0117100 | - | Detail |
| C2H8g28673 | 8:966,115-966,853 | - | C1H8g27211 | CX8g051486 | LOC_Os08g02400 | Os08g0117300 | - | Detail |
| C2H8g05377 | 8:970,492-971,983 | - | C1H8g03616 | CX8g051042 | LOC_Os08g02410 | Os08g0117300 | - | Detail |
| C2H8g28871 | 8:979,721-983,896 | + | C1H8g18021 | CX8g051930 | LOC_Os08g02440 | Os08g0117700 | - | Detail |
| C2H8g08451 | 8:985,811-988,370 | + | C1H8g01730 | CX8g050884 | LOC_Os08g02450 | Os08g0117800 | - | Detail |
| C2H8g01346 | 8:988,570-992,091 | - | C1H8g25615 | CX8g054061 | LOC_Os08g02460 | Os08g0117900 | - | Detail |
| C2H8g24056 | 8:998,832-1,002,400 | + | C1H8g04493 | CX8g052918 | LOC_Os08g02490 | Os08g0118000 | OsAHL1 | Detail |
| C2H8g26366 | 8:1,006,910-1,008,510 | - | C1H8g00235 | CX8g053796 | - | Os08g0118100 | - | Detail |
| C2H8g16077 | 8:1,030,639-1,030,959 | + | C1H8g00259 | CX8g051649 | LOC_Os08g02520 | Os08g0118500 | - | Detail |
| C2H8g19866 | 8:1,035,981-1,036,301 | + | C1H8g00259 | CX8g051776 | LOC_Os08g02530 | Os08g0118800 | - | Detail |
| C2H8g14690 | 8:1,037,519-1,046,204 | + | C1H8g01516 | CX8g052143 | LOC_Os08g02550 | Os08g0119000 | - | Detail |
| C2H8g01828 | 8:1,047,365-1,050,730 | + | C1H8g02381 | CX8g054631 | LOC_Os08g02560 | Os08g0119100 | - | Detail |
| C2H8g09704 | 8:1,056,388-1,059,061 | + | C1H8g02381 | CX8g053344 | LOC_Os08g02580 | Os08g0119300 | - | Detail |
| C2H8g16097 | 8:1,063,802-1,064,788 | + | C1H8g28736 | CX8g051681 | LOC_Os08g02600 | Os08g0119500 | - | Detail |
| C2H8g08245 | 8:1,068,834-1,069,911 | - | C1H8g30913 | CX8g053016 | - | Os08g0119700 | - | Detail |
| C2H8g26707 | 8:1,074,634-1,078,100 | - | C1H8g25670 | CX8g052847 | LOC_Os08g02640 | Os08g0120000 | SDH2-RPS14 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |