| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g30036 | 6:3,511,053-3,511,337 | - | C2H6g25998 | - | - | - | - | Detail |
| C1H6g29216 | 6:3,527,106-3,532,441 | + | C2H6g28335 | CX6g043481 | LOC_Os06g08440 | Os06g0183100 | ORR2, ORR2, B-type RR | Detail |
| C1H6g11123 | 6:3,532,648-3,539,976 | - | C2H6g18941 | CX6g041664 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C1H6g00515 | 6:3,550,436-3,550,870 | - | C2H6g26636 | CX6g043120 | LOC_Os06g08470 | Os06g0183700 | - | Detail |
| C1H6g09185 | 6:3,551,151-3,567,893 | - | C2H6g26382 | CX6g043183 | LOC_Os06g08480 | Os06g0183800 | OsCHR702, CHR702 | Detail |
| C1H6g27595 | 6:3,576,413-3,578,627 | - | C2H6g18991 | CX6g041255 | LOC_Os06g08500 | Os06g0184000 | OsRHL1 | Detail |
| C1H6g21452 | 6:3,584,546-3,586,451 | - | C2H6g17059 | CX6g045254 | LOC_Os06g08510 | Os06g0184100 | DPL2 | Detail |
| C1H6g01823 | 6:3,589,061-3,590,512 | - | C2H6g17339 | CX6g043502 | LOC_Os06g08520 | Os06g0184200 | - | Detail |
| C1H6g09856 | 6:3,598,244-3,603,345 | - | C2H6g05817 | CX6g045722 | LOC_Os06g08530 | Os06g0184300 | - | Detail |
| C1H6g07584 | 6:3,608,593-3,612,106 | + | C2H6g11053 | CX6g042782 | LOC_Os06g08540 | Os06g0184400 | - | Detail |
| C1H6g06067 | 6:3,613,742-3,617,783 | - | C2H6g09876 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| C1H6g31361 | 6:3,635,848-3,650,218 | + | C2H6g29520 | CX6g044915 | LOC_Os06g08560 | Os06g0184700 | - | Detail |
| C1H6g00502 | 6:3,650,602-3,650,934 | - | C2H6g08005 | CX6g045857 | LOC_Os06g08564 | Os06g0184800 | - | Detail |
| C1H6g26124 | 6:3,652,356-3,653,199 | - | C2H6g00968 | CX6g045857 | - | - | - | Detail |
| C1H6g31492 | 6:3,674,636-3,675,946 | + | C2H6g18987 | CX6g042282 | LOC_Os06g08610 | Os06g0185300 | - | Detail |
| C1H6g28072 | 6:3,711,927-3,715,238 | + | C2H6g15407 | CX6g041869 | LOC_Os06g08670 | Os06g0185900 | - | Detail |
| C1H6g05075 | 6:3,717,143-3,721,670 | + | C2H6g04610 | CX6g044236 | LOC_Os06g08680 | Os06g0186000 | - | Detail |
| C1H6g00841 | 6:3,723,023-3,726,340 | - | C2H6g29401 | CX6g042059 | LOC_Os06g08690 | Os06g0186100 | - | Detail |
| C1H6g04589 | 6:3,730,841-3,734,332 | - | C2H6g15979 | CX6g044426 | LOC_Os06g08710 | Os06g0186300 | - | Detail |
| C1H6g03621 | 6:3,738,757-3,744,414 | - | C2H6g07175 | CX6g043949 | LOC_Os06g08720 | Os06g0186400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17144 | 1:35,452,537-35,455,604 | + | C1H1g24083 | CX1g002654 | LOC_Os01g69040 | Os01g0919500 | - | Detail |
| C2H1g22206 | 1:35,463,866-35,466,764 | + | C1H1g24488 | CX1g001203 | LOC_Os01g69050 | Os01g0919600 | - | Detail |
| C2H1g29537 | 1:35,467,685-35,470,766 | + | C1H1g20104 | CX1g005901 | LOC_Os01g69060 | Os01g0919700 | - | Detail |
| C2H1g27432 | 1:35,471,143-35,477,314 | - | C1H1g05233 | CX1g003243 | LOC_Os01g69070 | Os01g0919800 | - | Detail |
| C2H1g17576 | 1:35,480,892-35,485,118 | - | C1H1g07064 | CX1g004468 | LOC_Os01g69080 | Os01g0919900 | - | Detail |
| C2H1g29795 | 1:35,492,919-35,497,341 | - | C1H1g22004 | CX1g001843 | LOC_Os01g69090 | Os01g0920000 | - | Detail |
| C2H1g14245 | 1:35,514,303-35,516,271 | + | C1H1g22093 | CX1g003295 | LOC_Os01g69100 | Os01g0920100 | - | Detail |
| C2H1g29600 | 1:35,517,612-35,519,683 | - | C1H1g30726 | CX1g000176 | LOC_Os01g69110 | Os01g0920200 | - | Detail |
| C2H1g21628 | 1:35,522,033-35,529,635 | + | C1H1g16048 | CX1g003195 | LOC_Os01g69120 | Os01g0920300 | - | Detail |
| C2H1g17133 | 1:35,529,711-35,537,879 | - | C1H1g14453 | CX1g001019 | LOC_Os01g69130 | Os01g0920400 | - | Detail |
| C2H1g29507 | 1:35,541,830-35,543,528 | + | C1H1g09369 | - | LOC_Os01g69140 | Os01g0920500 | - | Detail |
| C2H1g19096 | 1:35,550,500-35,553,337 | + | C1H1g20161 | - | LOC_Os01g69160 | Os01g0920700 | - | Detail |
| C2H1g19978 | 1:35,556,453-35,556,959 | - | - | - | - | - | - | Detail |
| C2H1g02874 | 1:35,559,469-35,562,106 | + | C1H1g18511 | - | LOC_Os01g69190 | Os01g0921000 | - | Detail |
| C2H1g14807 | 1:35,563,215-35,565,043 | + | C1H1g26741 | - | LOC_Os01g69190 | Os01g0921000 | - | Detail |
| C2H1g26257 | 1:35,566,705-35,569,727 | + | C1H1g17831 | - | LOC_Os01g69190 | Os01g0921000 | - | Detail |
| C2H1g02715 | 1:35,571,503-35,572,813 | + | C1H1g03135 | - | LOC_Os01g69200 | Os01g0921100 | - | Detail |
| C2H1g30128 | 1:35,574,349-35,582,716 | + | C1H1g30764 | CX1g002078 | LOC_Os01g69210 | Os01g0921200 | OsMOGS | Detail |
| C2H1g16671 | 1:35,583,795-35,586,898 | + | C1H1g26651 | CX1g003739 | LOC_Os01g69220 | Os01g0921300 | - | Detail |
| C2H1g02106 | 1:35,588,620-35,590,572 | + | C1H1g12748 | CX1g001141 | LOC_Os01g69230 | Os01g0921400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |