| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g30036 | 6:3,511,053-3,511,337 | - | C2H6g25998 | - | - | - | - | Detail |
| C1H6g29216 | 6:3,527,106-3,532,441 | + | C2H6g28335 | CX6g043481 | LOC_Os06g08440 | Os06g0183100 | ORR2, ORR2, B-type RR | Detail |
| C1H6g11123 | 6:3,532,648-3,539,976 | - | C2H6g18941 | CX6g041664 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C1H6g00515 | 6:3,550,436-3,550,870 | - | C2H6g26636 | CX6g043120 | LOC_Os06g08470 | Os06g0183700 | - | Detail |
| C1H6g09185 | 6:3,551,151-3,567,893 | - | C2H6g26382 | CX6g043183 | LOC_Os06g08480 | Os06g0183800 | OsCHR702, CHR702 | Detail |
| C1H6g27595 | 6:3,576,413-3,578,627 | - | C2H6g18991 | CX6g041255 | LOC_Os06g08500 | Os06g0184000 | OsRHL1 | Detail |
| C1H6g21452 | 6:3,584,546-3,586,451 | - | C2H6g17059 | CX6g045254 | LOC_Os06g08510 | Os06g0184100 | DPL2 | Detail |
| C1H6g01823 | 6:3,589,061-3,590,512 | - | C2H6g17339 | CX6g043502 | LOC_Os06g08520 | Os06g0184200 | - | Detail |
| C1H6g09856 | 6:3,598,244-3,603,345 | - | C2H6g05817 | CX6g045722 | LOC_Os06g08530 | Os06g0184300 | - | Detail |
| C1H6g07584 | 6:3,608,593-3,612,106 | + | C2H6g11053 | CX6g042782 | LOC_Os06g08540 | Os06g0184400 | - | Detail |
| C1H6g06067 | 6:3,613,742-3,617,783 | - | C2H6g09876 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| C1H6g31361 | 6:3,635,848-3,650,218 | + | C2H6g29520 | CX6g044915 | LOC_Os06g08560 | Os06g0184700 | - | Detail |
| C1H6g00502 | 6:3,650,602-3,650,934 | - | C2H6g08005 | CX6g045857 | LOC_Os06g08564 | Os06g0184800 | - | Detail |
| C1H6g26124 | 6:3,652,356-3,653,199 | - | C2H6g00968 | CX6g045857 | - | - | - | Detail |
| C1H6g31492 | 6:3,674,636-3,675,946 | + | C2H6g18987 | CX6g042282 | LOC_Os06g08610 | Os06g0185300 | - | Detail |
| C1H6g28072 | 6:3,711,927-3,715,238 | + | C2H6g15407 | CX6g041869 | LOC_Os06g08670 | Os06g0185900 | - | Detail |
| C1H6g05075 | 6:3,717,143-3,721,670 | + | C2H6g04610 | CX6g044236 | LOC_Os06g08680 | Os06g0186000 | - | Detail |
| C1H6g00841 | 6:3,723,023-3,726,340 | - | C2H6g29401 | CX6g042059 | LOC_Os06g08690 | Os06g0186100 | - | Detail |
| C1H6g04589 | 6:3,730,841-3,734,332 | - | C2H6g15979 | CX6g044426 | LOC_Os06g08710 | Os06g0186300 | - | Detail |
| C1H6g03621 | 6:3,738,757-3,744,414 | - | C2H6g07175 | CX6g043949 | LOC_Os06g08720 | Os06g0186400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17112 | 1:1,806,671-1,808,720 | + | C1H1g05122 | - | - | Os01g0139600 | - | Detail |
| C2H1g10438 | 1:1,812,631-1,812,942 | - | C1H1g03275 | CX1g005592 | LOC_Os01g04670 | Os01g0139700 | - | Detail |
| C2H1g06897 | 1:1,818,259-1,818,519 | - | C1H1g00558 | CX1g006410 | LOC_Os01g04690 | Os01g0139900 | - | Detail |
| C2H1g19050 | 1:1,827,392-1,828,885 | + | C1H1g20732 | CX1g001618 | LOC_Os01g04710 | Os01g0140100 | - | Detail |
| C2H1g22483 | 1:1,835,091-1,841,264 | + | C1H1g31447 | CX1g006468 | LOC_Os01g04720 | Os01g0140400 | - | Detail |
| C2H1g01847 | 1:1,841,812-1,842,285 | + | C1H11g10773 | CX1g000444 | LOC_Os01g04730 | Os01g0140500 | - | Detail |
| C2H1g19937 | 1:1,859,009-1,859,986 | + | C1H1g08742 | CX1g006554 | LOC_Os01g04750 | Os01g0140700 | OsRAV8 | Detail |
| C2H1g00612 | 1:1,883,238-1,884,341 | + | C1H1g08742 | CX1g004648 | LOC_Os01g04800 | Os01g0141000 | AP2/EREBP129, AP2/EREBP#129, OsRAV2, RAV2, OsRAV9, OsTEM1, OsRAV9/OsTEM1 | Detail |
| C2H1g12872 | 1:1,897,291-1,904,911 | - | C1H1g09982 | CX1g002238 | LOC_Os01g04814 | Os01g0141300 | - | Detail |
| C2H1g10361 | 1:1,911,034-1,914,184 | - | C1H1g01035 | CX1g004748 | LOC_Os01g04840 | Os01g0141300 | - | Detail |
| C2H1g30366 | 1:1,919,486-1,924,052 | + | C1H1g10013 | CX1g006709 | LOC_Os01g04860 | Os01g0141600 | - | Detail |
| C2H1g30003 | 1:1,924,491-1,928,743 | - | C1H1g07767 | CX1g005046 | LOC_Os01g04870 | Os01g0141700 | OsUV-DDB2 | Detail |
| C2H1g13473 | 1:1,932,131-1,936,292 | + | C1H1g20192 | CX1g003408 | LOC_Os01g04880 | Os01g0141900 | - | Detail |
| C2H1g10525 | 1:1,936,885-1,941,395 | - | C1H1g08627 | CX1g004217 | LOC_Os01g04900 | Os01g0142100 | - | Detail |
| C2H1g29642 | 1:1,941,607-1,943,614 | + | C1H1g24636 | CX1g004602 | LOC_Os01g04910 | Os01g0142200 | - | Detail |
| C2H1g02460 | 1:1,945,831-1,949,084 | + | C1H1g21356 | CX1g005334 | LOC_Os01g04920 | Os01g0142300 | SQD2.2, OsSQD2.2 | Detail |
| C2H1g07926 | 1:1,952,640-1,955,658 | - | C1H1g15125 | CX1g001148 | LOC_Os01g04930 | Os01g0142500 | Os2R_MYB2 | Detail |
| C2H1g24212 | 1:1,967,041-1,970,803 | + | C1H1g12761 | CX1g007203 | LOC_Os01g04950 | Os01g0142800 | - | Detail |
| C2H1g27664 | 1:1,981,213-1,987,698 | + | C1H1g04145 | CX1g004074 | LOC_Os01g16740 | Os01g0852650 | - | Detail |
| C2H1g02643 | 1:1,987,707-1,994,774 | - | C1H1g19528 | CX1g003393 | LOC_Os01g16730 | Os01g0946800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |