| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g30036 | 6:3,511,053-3,511,337 | - | C2H6g25998 | - | - | - | - | Detail |
| C1H6g29216 | 6:3,527,106-3,532,441 | + | C2H6g28335 | CX6g043481 | LOC_Os06g08440 | Os06g0183100 | ORR2, ORR2, B-type RR | Detail |
| C1H6g11123 | 6:3,532,648-3,539,976 | - | C2H6g18941 | CX6g041664 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C1H6g00515 | 6:3,550,436-3,550,870 | - | C2H6g26636 | CX6g043120 | LOC_Os06g08470 | Os06g0183700 | - | Detail |
| C1H6g09185 | 6:3,551,151-3,567,893 | - | C2H6g26382 | CX6g043183 | LOC_Os06g08480 | Os06g0183800 | OsCHR702, CHR702 | Detail |
| C1H6g27595 | 6:3,576,413-3,578,627 | - | C2H6g18991 | CX6g041255 | LOC_Os06g08500 | Os06g0184000 | OsRHL1 | Detail |
| C1H6g21452 | 6:3,584,546-3,586,451 | - | C2H6g17059 | CX6g045254 | LOC_Os06g08510 | Os06g0184100 | DPL2 | Detail |
| C1H6g01823 | 6:3,589,061-3,590,512 | - | C2H6g17339 | CX6g043502 | LOC_Os06g08520 | Os06g0184200 | - | Detail |
| C1H6g09856 | 6:3,598,244-3,603,345 | - | C2H6g05817 | CX6g045722 | LOC_Os06g08530 | Os06g0184300 | - | Detail |
| C1H6g07584 | 6:3,608,593-3,612,106 | + | C2H6g11053 | CX6g042782 | LOC_Os06g08540 | Os06g0184400 | - | Detail |
| C1H6g06067 | 6:3,613,742-3,617,783 | - | C2H6g09876 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| C1H6g31361 | 6:3,635,848-3,650,218 | + | C2H6g29520 | CX6g044915 | LOC_Os06g08560 | Os06g0184700 | - | Detail |
| C1H6g00502 | 6:3,650,602-3,650,934 | - | C2H6g08005 | CX6g045857 | LOC_Os06g08564 | Os06g0184800 | - | Detail |
| C1H6g26124 | 6:3,652,356-3,653,199 | - | C2H6g00968 | CX6g045857 | - | - | - | Detail |
| C1H6g31492 | 6:3,674,636-3,675,946 | + | C2H6g18987 | CX6g042282 | LOC_Os06g08610 | Os06g0185300 | - | Detail |
| C1H6g28072 | 6:3,711,927-3,715,238 | + | C2H6g15407 | CX6g041869 | LOC_Os06g08670 | Os06g0185900 | - | Detail |
| C1H6g05075 | 6:3,717,143-3,721,670 | + | C2H6g04610 | CX6g044236 | LOC_Os06g08680 | Os06g0186000 | - | Detail |
| C1H6g00841 | 6:3,723,023-3,726,340 | - | C2H6g29401 | CX6g042059 | LOC_Os06g08690 | Os06g0186100 | - | Detail |
| C1H6g04589 | 6:3,730,841-3,734,332 | - | C2H6g15979 | CX6g044426 | LOC_Os06g08710 | Os06g0186300 | - | Detail |
| C1H6g03621 | 6:3,738,757-3,744,414 | - | C2H6g07175 | CX6g043949 | LOC_Os06g08720 | Os06g0186400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g21298 | 5:24,370,851-24,378,723 | + | C1H5g11375 | CX5g040394 | LOC_Os05g50660 | Os05g0583500 | - | Detail |
| C2H5g22702 | 5:24,384,080-24,385,033 | + | C1H5g12339 | CX5g040044 | LOC_Os05g44090 | Os05g0583600 | - | Detail |
| C2H5g01078 | 5:24,388,586-24,389,818 | - | C1H5g13782 | CX5g040015 | LOC_Os05g50690 | Os05g0583950 | - | Detail |
| C2H5g06430 | 5:24,392,259-24,393,420 | + | C1H5g25754 | CX5g040625 | LOC_Os05g50700 | Os05g0183100 | OsWRKY67 | Detail |
| C2H5g22409 | 5:24,395,708-24,396,278 | - | C1H5g23722 | CX5g038552 | LOC_Os05g50710 | Os05g0584200 | - | Detail |
| C2H5g01350 | 5:24,397,473-24,398,219 | + | C1H5g29939 | CX5g037414 | LOC_Os05g50720 | Os05g0584300 | - | Detail |
| C2H5g11315 | 5:24,403,610-24,404,565 | - | C1H5g06457 | CX5g040723 | LOC_Os05g50730 | Os05g0584400 | - | Detail |
| C2H5g01570 | 5:24,409,676-24,414,803 | - | C1H5g14305 | CX5g037383 | LOC_Os05g50750 | Os05g0584600 | - | Detail |
| C2H5g08711 | 5:24,442,120-24,444,358 | + | C1H5g05102 | CX5g039086 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| C2H5g19125 | 5:24,451,398-24,453,724 | + | C1H5g03901 | CX5g036814 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| C2H5g30392 | 5:24,454,334-24,458,461 | - | C1H5g16468 | CX5g039624 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| C2H5g27655 | 5:24,460,511-24,461,197 | + | C1H5g19912 | - | LOC_Os05g50815 | Os05g0580900 | - | Detail |
| C2H5g10246 | 5:24,463,816-24,466,422 | - | C1H5g12424 | CX5g039076 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| C2H5g21671 | 5:24,469,908-24,471,983 | + | C1H5g08867 | CX5g037322 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| C2H5g07511 | 5:24,472,142-24,476,832 | - | C1H5g02224 | CX5g039391 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| C2H5g12537 | 5:24,499,027-24,504,297 | + | C1H5g05725 | CX5g037391 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| C2H5g22033 | 5:24,507,189-24,509,328 | - | C1H5g23433 | CX5g040329 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| C2H5g28495 | 5:24,513,017-24,518,798 | + | C1H5g03676 | CX5g037684 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| C2H5g17335 | 5:24,520,464-24,523,154 | + | C1H5g31726 | CX5g037746 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| C2H5g13829 | 5:24,524,099-24,528,487 | + | C1H5g23972 | CX5g037636 | LOC_Os05g50940 | Os05g0586700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |