| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g27514 | 6:3,350,648-3,351,041 | - | C2H6g18674 | CX6g044131 | LOC_Os06g08130 | - | - | Detail |
| C1H6g12023 | 6:3,351,863-3,355,628 | - | C2H6g30178 | CX6g042305 | LOC_Os06g08140 | Os06g0179700 | - | Detail |
| C1H6g05114 | 6:3,360,726-3,364,770 | - | C2H6g11242 | CX6g041452 | LOC_Os06g08154 | Os06g0179800 | - | Detail |
| C1H6g10380 | 6:3,366,674-3,369,216 | - | C2H6g07642 | CX6g041526 | LOC_Os06g08170 | Os06g0179900 | - | Detail |
| C1H6g06749 | 6:3,370,550-3,374,128 | - | C2H6g22837 | CX6g042763 | LOC_Os06g08180 | Os06g0180000 | - | Detail |
| C1H6g04952 | 6:3,377,020-3,377,202 | - | - | - | - | - | - | Detail |
| C1H6g31816 | 6:3,377,652-3,378,025 | - | - | CX6g042550 | LOC_Os06g08190 | Os06g0180100 | - | Detail |
| C1H6g07430 | 6:3,388,172-3,388,730 | - | C2H6g28565 | CX6g045176 | LOC_Os06g08220 | Os06g0180300 | - | Detail |
| C1H6g29780 | 6:3,390,692-3,391,309 | - | C2H6g08735 | CX6g044282 | LOC_Os06g08230 | Os06g0180300 | - | Detail |
| C1H6g31881 | 6:3,397,863-3,398,883 | - | C2H6g22906 | CX6g045023 | LOC_Os06g08250 | Os06g0101300 | - | Detail |
| C1H6g31540 | 6:3,410,659-3,416,178 | + | C2H6g15077 | CX6g043418 | LOC_Os06g08280 | Os06g0181200 | - | Detail |
| C1H6g07800 | 6:3,418,164-3,421,049 | + | C2H6g07474 | CX6g043325 | LOC_Os06g08290 | Os06g0181300 | AID1, OsMYBR57 | Detail |
| C1H6g28575 | 6:3,422,739-3,425,520 | + | C2H6g15863 | CX6g042874 | LOC_Os06g08300 | Os06g0181400 | - | Detail |
| C1H6g30964 | 6:3,426,901-3,429,591 | - | C2H6g07530 | CX6g043969 | LOC_Os06g08310 | Os06g0181500 | - | Detail |
| C1H6g17611 | 6:3,432,909-3,436,579 | - | C2H6g22978 | CX6g044511 | LOC_Os06g08320 | Os06g0181566 | - | Detail |
| C1H6g05796 | 6:3,440,684-3,441,330 | + | C2H6g26833 | CX6g043575 | LOC_Os06g08340 | Os06g0181700 | OsERF2 | Detail |
| C1H6g07696 | 6:3,466,197-3,467,099 | - | C2H6g04140 | CX6g044144 | LOC_Os06g08360 | Os06g0182100 | - | Detail |
| C1H6g28905 | 6:3,469,093-3,485,751 | - | C2H6g16390 | CX6g042053 | LOC_Os06g08380 | Os06g0182300 | GSL5, OsGSL5 | Detail |
| C1H6g20285 | 6:3,489,078-3,493,100 | + | C2H6g02045 | CX6g041705 | LOC_Os06g08390 | - | - | Detail |
| C1H6g18809 | 6:3,494,348-3,502,238 | + | C2H6g17246 | CX6g042466 | LOC_Os06g08400 | Os06g0182500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g14118 | 1:32,395,517-32,401,373 | + | C1H1g24327 | CX1g006965 | LOC_Os01g63220 | Os01g0851000 | WLP2, OsFLN1 | Detail |
| C2H1g23902 | 1:32,398,168-32,402,851 | - | C1H1g16353 | CX1g000066 | LOC_Os01g63230 | Os01g0851100 | - | Detail |
| C2H1g01345 | 1:32,406,775-32,409,102 | - | C1H1g19302 | CX1g003216 | LOC_Os01g63240 | Os01g0851300 | - | Detail |
| C2H1g07756 | 1:32,420,236-32,424,345 | - | C1H1g13651 | CX1g000616 | LOC_Os01g63250 | Os01g0851400 | - | Detail |
| C2H1g20633 | 1:32,434,269-32,440,537 | - | C1H1g15673 | CX1g001220 | LOC_Os01g63270 | Os01g0851700 | - | Detail |
| C2H1g02734 | 1:32,446,598-32,449,665 | - | C1H1g03471 | CX1g001145 | LOC_Os01g63280 | Os01g0852100 | - | Detail |
| C2H1g20941 | 1:32,450,205-32,454,017 | - | C1H1g05192 | CX1g001502 | LOC_Os01g63290 | Os01g0852200 | OsPHT4;3 | Detail |
| C2H1g02794 | 1:32,471,192-32,473,761 | - | C1H1g31702 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C2H1g02458 | 1:32,475,228-32,475,873 | - | C1H1g31702 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C2H1g22636 | 1:32,481,628-32,483,736 | + | C1H1g31372 | CX1g005825 | LOC_Os01g63400 | Os01g0852900 | - | Detail |
| C2H1g00294 | 1:32,484,972-32,486,025 | - | C1H1g22680 | CX1g001333 | LOC_Os01g63410 | Os01g0853000 | - | Detail |
| C2H1g03435 | 1:32,498,447-32,502,232 | + | C1H1g21861 | CX1g004784 | LOC_Os01g63420 | Os01g0853400 | OsCOI1a, OsCOI1, Os_F0728 | Detail |
| C2H1g21411 | 1:32,510,019-32,510,465 | + | C1H1g01084 | CX1g005287 | - | - | - | Detail |
| C2H1g02642 | 1:32,512,794-32,514,472 | - | C1H1g22221 | CX1g001449 | LOC_Os01g63460 | Os01g0853700 | - | Detail |
| C2H1g15087 | 1:32,557,274-32,557,974 | - | C1H1g30766 | CX1g000677 | LOC_Os01g63510 | Os01g0854500 | QHB | Detail |
| C2H1g11964 | 1:32,568,881-32,574,221 | - | C1H1g06653 | CX1g000343 | LOC_Os01g63580 | Os01g0855000 | - | Detail |
| C2H1g08929 | 1:32,583,855-32,589,389 | - | - | - | - | - | - | Detail |
| C2H1g27825 | 1:32,594,203-32,596,288 | + | C1H1g12873 | CX1g005974 | LOC_Os01g63620 | Os01g0855200 | - | Detail |
| C2H1g08166 | 1:32,609,134-32,611,262 | + | C1H1g14003 | CX1g003617 | LOC_Os01g63680 | Os01g0855400 | Os2R_MYB17 | Detail |
| C2H1g04964 | 1:32,624,570-32,628,271 | + | C1H1g14553 | CX1g004920 | LOC_Os01g63710 | Os01g0856000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |