| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10702 | 6:2,358,334-2,363,633 | + | C2H6g22760 | CX6g041514 | LOC_Os06g06280 | Os06g0156900 | - | Detail |
| C1H6g08331 | 6:2,364,398-2,367,299 | - | C2H6g18770 | CX6g041481 | LOC_Os06g06290 | Os06g0157000 | - | Detail |
| C1H6g29479 | 6:2,382,620-2,383,929 | + | C2H6g09001 | CX6g042252 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| C1H6g06407 | 6:2,394,218-2,394,830 | + | C2H6g08710 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C1H6g09433 | 6:2,396,169-2,396,592 | + | C2H6g23992 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C1H6g29691 | 6:2,400,745-2,401,110 | + | C2H6g09872 | CX6g041455 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| C1H6g17983 | 6:2,401,145-2,401,854 | - | - | - | - | - | - | Detail |
| C1H6g13605 | 6:2,403,300-2,403,780 | + | C2H6g19375 | CX6g043465 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| C1H6g01052 | 6:2,405,333-2,413,066 | + | C2H6g03223 | CX6g041165 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| C1H6g08202 | 6:2,415,170-2,418,470 | + | C2H6g20805 | CX6g041162 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| C1H6g28677 | 6:2,420,830-2,427,627 | + | C2H6g18246 | CX6g044558 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| C1H6g07185 | 6:2,428,154-2,433,934 | - | C2H6g22243 | CX6g044801 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| C1H6g00361 | 6:2,437,468-2,440,022 | - | C2H6g03461 | CX6g045279 | LOC_Os06g06380 | Os06g0158400 | - | Detail |
| C1H6g04562 | 6:2,441,500-2,445,061 | - | C2H6g12842 | CX6g044801 | LOC_Os06g06400 | Os06g0158500 | - | Detail |
| C1H6g29953 | 6:2,448,280-2,450,849 | - | C2H6g18686 | CX6g045460 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| C1H6g03313 | 6:2,451,132-2,453,154 | + | C2H6g03596 | - | LOC_Os06g06420 | Os06g0158700 | - | Detail |
| C1H6g02873 | 6:2,456,168-2,466,853 | - | C2H6g14590 | CX6g041204 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |
| C1H6g15545 | 6:2,490,044-2,493,647 | + | C2H6g19286 | CX6g044205 | LOC_Os06g06450 | Os06g0159400 | - | Detail |
| C1H6g14833 | 6:2,496,564-2,500,564 | + | C2H6g03704 | CX6g044205 | LOC_Os06g06470 | Os06g0159600 | - | Detail |
| C1H6g29654 | 6:2,509,973-2,513,890 | + | C2H6g13339 | CX6g041545 | LOC_Os06g06490 | Os06g0159900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g25752 | 1:20,321,668-20,323,820 | + | C1H1g14894 | CX1g004552 | LOC_Os01g40380 | Os01g0597400 | - | Detail |
| C2H1g11089 | 1:20,328,598-20,330,314 | - | C1H1g12129 | CX1g002473 | LOC_Os01g40390 | Os01g0586000 | - | Detail |
| C2H1g12891 | 1:20,335,777-20,337,749 | - | C1H1g24601 | CX1g006042 | LOC_Os01g40400 | Os01g0586400 | OsHDA701 | Detail |
| C2H1g02507 | 1:20,343,042-20,345,899 | + | C1H1g18149 | CX1g004552 | LOC_Os01g40410 | Os01g0597400 | - | Detail |
| C2H1g19784 | 1:20,348,609-20,351,452 | - | C1H1g11683 | CX1g002846 | LOC_Os01g40420 | Os01g0586600 | - | Detail |
| C2H1g10755 | 1:20,352,785-20,355,129 | - | C1H1g10522 | CX1g001647 | LOC_Os01g40430 | Os01g0586800 | - | Detail |
| C2H1g11806 | 1:20,368,069-20,372,409 | - | C1H1g11543 | CX1g007056 | LOC_Os01g40470 | Os01g0587000 | OsV-ATPase d | Detail |
| C2H1g20662 | 1:20,399,421-20,400,697 | - | C1H1g03796 | CX1g002222 | LOC_Os01g40550 | Os01g0588000 | - | Detail |
| C2H1g02821 | 1:20,405,260-20,406,706 | + | C1H1g09363 | CX1g005174 | LOC_Os01g40560 | Os01g0588100 | - | Detail |
| C2H1g28194 | 1:20,407,877-20,410,417 | - | C1H1g20954 | CX1g001885 | LOC_Os01g40570 | Os01g0588200 | - | Detail |
| C2H1g12904 | 1:20,414,006-20,414,283 | - | C1H1g27905 | - | - | - | - | Detail |
| C2H1g12033 | 1:20,414,432-20,414,748 | - | C1H1g27905 | CX1g006765 | - | - | - | Detail |
| C2H1g29314 | 1:20,414,785-20,417,073 | - | C1H1g21269 | CX1g000767 | LOC_Os01g40580 | Os01g0588400 | - | Detail |
| C2H1g12903 | 1:20,420,425-20,424,025 | - | C1H1g13505 | CX1g004767 | LOC_Os01g40590 | Os01g0588500 | - | Detail |
| C2H1g00643 | 1:20,424,457-20,424,954 | + | - | - | - | - | - | Detail |
| C2H1g21487 | 1:20,431,596-20,432,488 | + | C1H1g29468 | CX1g001225 | LOC_Os01g40600 | Os01g0588600 | - | Detail |
| C2H1g01426 | 1:20,433,758-20,438,916 | + | C1H1g14625 | CX1g002671 | LOC_Os01g40610 | Os01g0588700 | - | Detail |
| C2H1g18453 | 1:20,448,602-20,452,519 | + | C1H1g04980 | CX1g002699 | LOC_Os01g40620 | Os01g0588800 | - | Detail |
| C2H1g18605 | 1:20,455,600-20,459,145 | - | C1H1g04778 | CX1g006481 | LOC_Os01g40630 | Os01g0588900 | - | Detail |
| C2H1g14487 | 1:20,485,409-20,488,021 | - | C1H1g16899 | CX1g006782 | LOC_Os01g40640 | Os01g0589000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |