| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10702 | 6:2,358,334-2,363,633 | + | C2H6g22760 | CX6g041514 | LOC_Os06g06280 | Os06g0156900 | - | Detail |
| C1H6g08331 | 6:2,364,398-2,367,299 | - | C2H6g18770 | CX6g041481 | LOC_Os06g06290 | Os06g0157000 | - | Detail |
| C1H6g29479 | 6:2,382,620-2,383,929 | + | C2H6g09001 | CX6g042252 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| C1H6g06407 | 6:2,394,218-2,394,830 | + | C2H6g08710 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C1H6g09433 | 6:2,396,169-2,396,592 | + | C2H6g23992 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C1H6g29691 | 6:2,400,745-2,401,110 | + | C2H6g09872 | CX6g041455 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| C1H6g17983 | 6:2,401,145-2,401,854 | - | - | - | - | - | - | Detail |
| C1H6g13605 | 6:2,403,300-2,403,780 | + | C2H6g19375 | CX6g043465 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| C1H6g01052 | 6:2,405,333-2,413,066 | + | C2H6g03223 | CX6g041165 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| C1H6g08202 | 6:2,415,170-2,418,470 | + | C2H6g20805 | CX6g041162 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| C1H6g28677 | 6:2,420,830-2,427,627 | + | C2H6g18246 | CX6g044558 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| C1H6g07185 | 6:2,428,154-2,433,934 | - | C2H6g22243 | CX6g044801 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| C1H6g00361 | 6:2,437,468-2,440,022 | - | C2H6g03461 | CX6g045279 | LOC_Os06g06380 | Os06g0158400 | - | Detail |
| C1H6g04562 | 6:2,441,500-2,445,061 | - | C2H6g12842 | CX6g044801 | LOC_Os06g06400 | Os06g0158500 | - | Detail |
| C1H6g29953 | 6:2,448,280-2,450,849 | - | C2H6g18686 | CX6g045460 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| C1H6g03313 | 6:2,451,132-2,453,154 | + | C2H6g03596 | - | LOC_Os06g06420 | Os06g0158700 | - | Detail |
| C1H6g02873 | 6:2,456,168-2,466,853 | - | C2H6g14590 | CX6g041204 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |
| C1H6g15545 | 6:2,490,044-2,493,647 | + | C2H6g19286 | CX6g044205 | LOC_Os06g06450 | Os06g0159400 | - | Detail |
| C1H6g14833 | 6:2,496,564-2,500,564 | + | C2H6g03704 | CX6g044205 | LOC_Os06g06470 | Os06g0159600 | - | Detail |
| C1H6g29654 | 6:2,509,973-2,513,890 | + | C2H6g13339 | CX6g041545 | LOC_Os06g06490 | Os06g0159900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15398 | 2:23,307,236-23,312,726 | + | C1H2g25292 | CX2g019605 | LOC_Os02g41520 | Os02g0624400 | - | Detail |
| C2H2g09545 | 2:23,316,685-23,323,068 | + | C1H2g21346 | CX2g021076 | LOC_Os02g41550 | Os02g0625000 | - | Detail |
| C2H2g03881 | 2:23,325,318-23,326,799 | + | C1H2g19195 | CX2g022778 | LOC_Os02g41560 | Os02g0625100 | - | Detail |
| C2H2g18059 | 2:23,338,552-23,339,994 | + | C1H2g17897 | CX2g019216 | LOC_Os02g41580 | Os02g0625300 | - | Detail |
| C2H2g11933 | 2:23,344,561-23,350,244 | - | C1H2g11053 | CX2g019321 | LOC_Os02g41590 | Os02g0625500 | - | Detail |
| C2H2g22654 | 2:23,357,208-23,363,875 | + | C1H2g01239 | CX2g021369 | LOC_Os02g41610 | Os02g0625900 | - | Detail |
| C2H2g12458 | 2:23,373,856-23,377,779 | - | C1H2g24503 | CX2g019721 | LOC_Os02g41630 | Os02g0626100 | - | Detail |
| C2H2g01685 | 2:23,386,300-23,391,219 | - | C1H2g10363 | CX2g021604 | LOC_Os02g41650 | Os02g0626400 | - | Detail |
| C2H2g30462 | 2:23,394,640-23,396,781 | - | C1H2g23853 | CX2g023963 | LOC_Os02g41670 | Os02g0626600 | PAL3 | Detail |
| C2H2g15020 | 2:23,399,772-23,402,394 | - | C1H2g05283 | CX2g024160 | LOC_Os02g41680 | Os02g0627100 | OsPAL4 | Detail |
| C2H2g27127 | 2:23,422,550-23,425,349 | + | C1H2g07931 | CX2g021913 | LOC_Os02g41710 | Os02g0627700 | OsCNGC7 | Detail |
| C2H2g10818 | 2:23,426,658-23,427,514 | - | C1H2g13176 | CX2g021975 | LOC_Os02g41760 | Os02g0627900 | - | Detail |
| C2H2g11015 | 2:23,432,712-23,435,727 | + | C1H2g03519 | CX2g024868 | LOC_Os02g41770 | Os02g0628000 | - | Detail |
| C2H2g02567 | 2:23,436,281-23,436,529 | - | - | CX2g021292 | - | Os02g0628100 | - | Detail |
| C2H2g16036 | 2:23,441,908-23,445,862 | + | C1H2g23138 | CX2g021958 | LOC_Os02g41780 | Os02g0628200 | - | Detail |
| C2H2g16187 | 2:23,456,018-23,458,684 | + | C1H2g27536 | CX2g023005 | LOC_Os02g41800 | Os02g0628600 | - | Detail |
| C2H2g19637 | 2:23,471,815-23,472,036 | - | C1H11g05178 | CX2g020319 | LOC_Os02g41820 | Os02g0628800 | OsUBL5.1 | Detail |
| C2H2g07888 | 2:23,475,768-23,476,423 | + | - | - | LOC_Os02g41830 | Os02g0628900 | - | Detail |
| C2H2g29229 | 2:23,479,272-23,479,784 | - | - | CX2g022137 | LOC_Os02g41840 | Os02g0629000 | - | Detail |
| C2H2g09411 | 2:23,486,790-23,490,298 | + | C1H2g18314 | CX2g022423 | LOC_Os02g41860 | Os02g0629200 | OsPIP2;2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |