| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10702 | 6:2,358,334-2,363,633 | + | C2H6g22760 | CX6g041514 | LOC_Os06g06280 | Os06g0156900 | - | Detail |
| C1H6g08331 | 6:2,364,398-2,367,299 | - | C2H6g18770 | CX6g041481 | LOC_Os06g06290 | Os06g0157000 | - | Detail |
| C1H6g29479 | 6:2,382,620-2,383,929 | + | C2H6g09001 | CX6g042252 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| C1H6g06407 | 6:2,394,218-2,394,830 | + | C2H6g08710 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C1H6g09433 | 6:2,396,169-2,396,592 | + | C2H6g23992 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C1H6g29691 | 6:2,400,745-2,401,110 | + | C2H6g09872 | CX6g041455 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| C1H6g17983 | 6:2,401,145-2,401,854 | - | - | - | - | - | - | Detail |
| C1H6g13605 | 6:2,403,300-2,403,780 | + | C2H6g19375 | CX6g043465 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| C1H6g01052 | 6:2,405,333-2,413,066 | + | C2H6g03223 | CX6g041165 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| C1H6g08202 | 6:2,415,170-2,418,470 | + | C2H6g20805 | CX6g041162 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| C1H6g28677 | 6:2,420,830-2,427,627 | + | C2H6g18246 | CX6g044558 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| C1H6g07185 | 6:2,428,154-2,433,934 | - | C2H6g22243 | CX6g044801 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| C1H6g00361 | 6:2,437,468-2,440,022 | - | C2H6g03461 | CX6g045279 | LOC_Os06g06380 | Os06g0158400 | - | Detail |
| C1H6g04562 | 6:2,441,500-2,445,061 | - | C2H6g12842 | CX6g044801 | LOC_Os06g06400 | Os06g0158500 | - | Detail |
| C1H6g29953 | 6:2,448,280-2,450,849 | - | C2H6g18686 | CX6g045460 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| C1H6g03313 | 6:2,451,132-2,453,154 | + | C2H6g03596 | - | LOC_Os06g06420 | Os06g0158700 | - | Detail |
| C1H6g02873 | 6:2,456,168-2,466,853 | - | C2H6g14590 | CX6g041204 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |
| C1H6g15545 | 6:2,490,044-2,493,647 | + | C2H6g19286 | CX6g044205 | LOC_Os06g06450 | Os06g0159400 | - | Detail |
| C1H6g14833 | 6:2,496,564-2,500,564 | + | C2H6g03704 | CX6g044205 | LOC_Os06g06470 | Os06g0159600 | - | Detail |
| C1H6g29654 | 6:2,509,973-2,513,890 | + | C2H6g13339 | CX6g041545 | LOC_Os06g06490 | Os06g0159900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g13326 | 2:3,588,053-3,590,715 | - | C1H2g08053 | CX2g020425 | LOC_Os02g07920 | Os02g0175900 | - | Detail |
| C2H2g22576 | 2:3,592,545-3,592,920 | - | - | - | - | - | - | Detail |
| C2H2g12429 | 2:3,596,184-3,596,852 | - | C1H2g09013 | CX2g024012 | LOC_Os02g07930 | Os02g0176000 | - | Detail |
| C2H2g10282 | 2:3,613,439-3,623,803 | - | C1H2g28078 | CX2g024713 | LOC_Os02g07960 | Os02g0176100 | - | Detail |
| C2H2g27167 | 2:3,638,922-3,640,311 | - | C1H2g25304 | CX2g023070 | LOC_Os02g07980 | Os02g0176400 | - | Detail |
| C2H2g16155 | 2:3,651,851-3,665,134 | - | C1H2g10513 | CX2g023980 | LOC_Os02g08010 | Os02g0176700 | OsACA9 | Detail |
| C2H2g12184 | 2:3,672,081-3,672,663 | - | - | - | - | - | - | Detail |
| C2H2g22723 | 2:3,680,501-3,683,234 | - | C1H2g25148 | CX2g022339 | LOC_Os02g08030 | Os02g0176900 | - | Detail |
| C2H2g01390 | 2:3,700,208-3,703,788 | + | C1H2g16100 | CX2g022848 | LOC_Os02g08070 | Os02g0177300 | - | Detail |
| C2H2g10970 | 2:3,712,383-3,716,534 | - | C1H2g15920 | CX2g024774 | LOC_Os02g08080 | Os02g0177400 | - | Detail |
| C2H2g24704 | 2:3,717,510-3,720,546 | - | C1H2g27198 | CX2g020793 | LOC_Os02g08090 | Os02g0177500 | - | Detail |
| C2H2g12631 | 2:3,726,595-3,731,994 | + | C1H2g08951 | CX2g022957 | LOC_Os02g08100 | Os02g0177600 | 4CL3, Os4CL3 | Detail |
| C2H2g27738 | 2:3,733,013-3,734,807 | - | C1H2g09011 | CX2g022286 | LOC_Os02g08110 | Os02g0177700 | - | Detail |
| C2H2g12927 | 2:3,743,297-3,749,181 | - | C1H2g27287 | CX2g022124 | LOC_Os02g08120 | Os02g0177800 | - | Detail |
| C2H2g07746 | 2:3,752,307-3,757,112 | + | C1H2g28459 | CX2g019995 | LOC_Os02g08130 | Os02g0177900 | - | Detail |
| C2H2g14463 | 2:3,757,065-3,760,131 | - | C1H2g30647 | CX2g024854 | LOC_Os02g08140 | Os02g0178000 | - | Detail |
| C2H2g17770 | 2:3,765,081-3,766,445 | + | C1H2g28373 | CX2g023396 | LOC_Os02g08150 | Os02g0178100 | - | Detail |
| C2H2g04824 | 2:3,768,438-3,772,203 | + | C1H2g21750 | CX2g020766 | LOC_Os02g08160 | Os02g0178200 | - | Detail |
| C2H2g23387 | 2:3,780,280-3,782,362 | + | C1H2g28628 | CX2g023441 | LOC_Os02g08180 | Os02g0178400 | - | Detail |
| C2H2g26582 | 2:3,782,576-3,786,188 | - | C1H2g01304 | CX2g023345 | LOC_Os02g08190 | Os02g0178500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |