| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10702 | 6:2,358,334-2,363,633 | + | C2H6g22760 | CX6g041514 | LOC_Os06g06280 | Os06g0156900 | - | Detail |
| C1H6g08331 | 6:2,364,398-2,367,299 | - | C2H6g18770 | CX6g041481 | LOC_Os06g06290 | Os06g0157000 | - | Detail |
| C1H6g29479 | 6:2,382,620-2,383,929 | + | C2H6g09001 | CX6g042252 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| C1H6g06407 | 6:2,394,218-2,394,830 | + | C2H6g08710 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C1H6g09433 | 6:2,396,169-2,396,592 | + | C2H6g23992 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C1H6g29691 | 6:2,400,745-2,401,110 | + | C2H6g09872 | CX6g041455 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| C1H6g17983 | 6:2,401,145-2,401,854 | - | - | - | - | - | - | Detail |
| C1H6g13605 | 6:2,403,300-2,403,780 | + | C2H6g19375 | CX6g043465 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| C1H6g01052 | 6:2,405,333-2,413,066 | + | C2H6g03223 | CX6g041165 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| C1H6g08202 | 6:2,415,170-2,418,470 | + | C2H6g20805 | CX6g041162 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| C1H6g28677 | 6:2,420,830-2,427,627 | + | C2H6g18246 | CX6g044558 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| C1H6g07185 | 6:2,428,154-2,433,934 | - | C2H6g22243 | CX6g044801 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| C1H6g00361 | 6:2,437,468-2,440,022 | - | C2H6g03461 | CX6g045279 | LOC_Os06g06380 | Os06g0158400 | - | Detail |
| C1H6g04562 | 6:2,441,500-2,445,061 | - | C2H6g12842 | CX6g044801 | LOC_Os06g06400 | Os06g0158500 | - | Detail |
| C1H6g29953 | 6:2,448,280-2,450,849 | - | C2H6g18686 | CX6g045460 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| C1H6g03313 | 6:2,451,132-2,453,154 | + | C2H6g03596 | - | LOC_Os06g06420 | Os06g0158700 | - | Detail |
| C1H6g02873 | 6:2,456,168-2,466,853 | - | C2H6g14590 | CX6g041204 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |
| C1H6g15545 | 6:2,490,044-2,493,647 | + | C2H6g19286 | CX6g044205 | LOC_Os06g06450 | Os06g0159400 | - | Detail |
| C1H6g14833 | 6:2,496,564-2,500,564 | + | C2H6g03704 | CX6g044205 | LOC_Os06g06470 | Os06g0159600 | - | Detail |
| C1H6g29654 | 6:2,509,973-2,513,890 | + | C2H6g13339 | CX6g041545 | LOC_Os06g06490 | Os06g0159900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g27679 | 5:21,446,809-21,448,424 | + | C1H5g21636 | CX5g038171 | LOC_Os05g43930 | Os05g0515500 | OsASMT3 | Detail |
| C2H5g07980 | 5:21,459,705-21,461,313 | - | C1H5g21636 | CX5g038512 | LOC_Os05g43940 | Os05g0515600 | OsCOMT9 | Detail |
| C2H5g04015 | 5:21,465,959-21,469,788 | + | C1H5g00839 | CX5g037498 | LOC_Os05g43950 | Os05g0515700 | OsVOZ2 | Detail |
| C2H5g16276 | 5:21,470,543-21,472,216 | - | C1H5g13776 | CX5g039793 | LOC_Os05g43960 | Os05g0415400 | OsNAC24 | Detail |
| C2H5g17758 | 5:21,472,580-21,476,442 | + | C1H5g03749 | CX5g038707 | LOC_Os05g43970 | Os05g0515900 | - | Detail |
| C2H5g19371 | 5:21,479,854-21,480,213 | - | C1H5g20589 | CX5g039772 | LOC_Os01g54800 | Os05g0516100 | - | Detail |
| C2H5g04233 | 5:21,484,053-21,486,164 | + | C1H5g26916 | CX5g039979 | LOC_Os05g44020 | Os05g0516300 | - | Detail |
| C2H5g24477 | 5:21,488,412-21,490,154 | + | - | - | - | - | - | Detail |
| C2H5g15773 | 5:21,488,859-21,489,953 | - | C1H5g24467 | CX5g039876 | - | Os05g0516475 | - | Detail |
| C2H5g13797 | 5:21,491,603-21,493,790 | + | C1H5g19283 | CX5g038417 | LOC_Os05g44030 | Os05g0516400 | - | Detail |
| C2H5g04641 | 5:21,495,897-21,498,588 | + | C1H5g14981 | CX5g039493 | LOC_Os05g44050 | Os05g0516600 | OsRab7, OsRab7B3 | Detail |
| C2H5g05743 | 5:21,499,514-21,500,047 | + | C1H5g10610 | CX5g041146 | LOC_Os05g44060 | Os05g0516700 | - | Detail |
| C2H5g24588 | 5:21,500,787-21,502,519 | - | C1H5g21266 | CX5g039048 | LOC_Os05g44070 | Os05g0516800 | - | Detail |
| C2H5g20039 | 5:21,504,562-21,510,450 | + | C1H5g05035 | CX5g039615 | LOC_Os05g44080 | Os05g0516900 | OsMac3 | Detail |
| C2H5g04869 | 5:21,511,527-21,512,471 | - | C1H5g21400 | CX5g038718 | LOC_Os05g44090 | Os05g0517100 | - | Detail |
| C2H5g18358 | 5:21,517,765-21,522,525 | + | C1H5g00428 | CX5g040204 | LOC_Os05g44100 | Os05g0517200 | - | Detail |
| C2H5g21345 | 5:21,525,685-21,526,736 | + | C1H5g00439 | CX5g037887 | LOC_Os05g44120 | Os05g0517400 | - | Detail |
| C2H5g27310 | 5:21,528,516-21,532,703 | - | C1H5g15240 | CX5g040072 | LOC_Os05g44130 | Os05g0517500 | - | Detail |
| C2H5g03251 | 5:21,533,871-21,537,153 | - | C1H5g27527 | CX5g039695 | LOC_Os05g44140 | Os05g0517600 | Hb5 | Detail |
| C2H5g27370 | 5:21,538,256-21,540,460 | + | C1H5g21769 | CX5g040040 | LOC_Os05g44160 | Os05g0517800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |