| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g19663 | 6:1,774,370-1,775,440 | + | C2H6g00113 | CX6g041208 | LOC_Os06g05190 | Os06g0144000 | OsXRCC1 | Detail |
| C1H6g07683 | 6:1,780,602-1,782,042 | - | C2H6g04638 | CX6g043790 | LOC_Os06g05260 | Os06g0144900 | OsPLL7 | Detail |
| C1H6g25149 | 6:1,783,155-1,788,421 | + | C2H6g17269 | CX6g043358 | LOC_Os06g05250 | Os06g0144800 | - | Detail |
| C1H6g10899 | 6:1,789,715-1,797,030 | + | C2H6g23771 | CX6g045316 | LOC_Os06g05240 | Os06g0144600 | - | Detail |
| C1H6g31237 | 6:1,808,092-1,811,999 | - | C2H6g13388 | CX6g042959 | LOC_Os06g05220 | Os06g0278000 | - | Detail |
| C1H6g11997 | 6:1,814,462-1,815,861 | + | C2H6g27643 | CX6g044318 | LOC_Os06g05272 | Os06g0145000 | OsPLL8 | Detail |
| C1H6g16835 | 6:1,824,655-1,826,225 | + | C2H6g08117 | CX6g044252 | LOC_Os06g05284 | Os06g0145200 | - | Detail |
| C1H6g00499 | 6:1,828,294-1,830,190 | + | C2H6g06407 | CX6g044380 | LOC_Os06g05300 | Os06g0145300 | - | Detail |
| C1H6g27412 | 6:1,831,356-1,834,038 | + | C2H6g10577 | CX6g044398 | LOC_Os06g05310 | Os06g0145600 | - | Detail |
| C1H6g15042 | 6:1,836,364-1,840,428 | + | C2H6g00938 | CX6g044398 | LOC_Os06g05320 | Os06g0145600 | - | Detail |
| C1H6g28860 | 6:1,842,232-1,844,939 | - | C2H6g26989 | CX6g044776 | LOC_Os06g05340 | Os06g0145700 | OsWRI4, OsWRI5a | Detail |
| C1H6g04809 | 6:1,848,365-1,850,980 | + | C2H6g09415 | CX6g041367 | LOC_Os06g05350 | Os06g0145800 | OsWHY1 | Detail |
| C1H6g06658 | 6:1,853,732-1,858,346 | + | C2H6g30158 | CX6g045545 | LOC_Os06g05359 | Os06g0146100 | - | Detail |
| C1H6g06921 | 6:1,861,173-1,865,499 | + | C2H6g30158 | CX6g045545 | LOC_Os06g05359 | Os06g0146100 | - | Detail |
| C1H6g10315 | 6:1,874,261-1,880,113 | + | C2H6g10065 | CX6g042551 | LOC_Os06g05380 | Os06g0146250 | - | Detail |
| C1H6g01868 | 6:1,880,389-1,884,118 | - | C2H6g11563 | CX6g044514 | LOC_Os06g05390 | Os06g0146300 | - | Detail |
| C1H6g20638 | 6:1,884,710-1,886,545 | - | C2H6g22438 | CX6g043905 | LOC_Os06g05400 | Os06g0146400 | - | Detail |
| C1H6g00120 | 6:1,905,500-1,905,856 | - | C2H6g07839 | - | LOC_Os06g05430 | Os06g0147000 | - | Detail |
| C1H6g20647 | 6:1,909,174-1,909,533 | - | C2H6g00032 | - | LOC_Os06g05440 | Os06g0147100 | - | Detail |
| C1H6g01236 | 6:1,921,822-1,924,074 | - | C2H6g00111 | - | LOC_Os06g05480 | Os06g0147400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14587 | 4:25,910,918-25,914,065 | + | C1H4g08529 | CX4g031568 | LOC_Os04g50920 | Os04g0597300 | OsWRKY37 | Detail |
| C2H4g10163 | 4:25,920,589-25,923,939 | + | C1H4g06047 | CX4g032482 | LOC_Os04g50930 | Os04g0597400 | OsNPF7.6 | Detail |
| C2H4g28892 | 4:25,929,260-25,931,882 | + | C1H4g02149 | CX4g035098 | LOC_Os04g50940 | Os04g0597600 | OsNPF7.4a, OsNPF7.4 | Detail |
| C2H4g23843 | 4:25,934,133-25,937,592 | + | C1H4g05496 | CX4g035098 | LOC_Os04g50950 | Os04g0597800 | OsPTR6, OsNPF7.3 | Detail |
| C2H4g13606 | 4:25,939,410-25,942,239 | + | C1H4g28441 | CX4g032040 | LOC_Os04g50960 | Os04g0597900 | - | Detail |
| C2H4g26740 | 4:25,943,074-25,945,753 | - | C1H4g06669 | CX4g036258 | LOC_Os04g50970 | Os04g0598000 | - | Detail |
| C2H4g23664 | 4:25,951,331-25,951,831 | + | - | CX4g032903 | LOC_Os04g50990 | Os04g0598200 | - | Detail |
| C2H4g22999 | 4:25,953,653-25,956,392 | - | C1H4g18615 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C2H4g16283 | 4:25,966,213-25,968,916 | + | C1H4g12663 | CX4g032270 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C2H4g19837 | 4:25,979,243-25,984,049 | + | C1H4g19687 | CX4g033918 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C2H4g26708 | 4:25,984,843-25,987,348 | - | C1H4g27427 | CX4g033732 | LOC_Os04g51040 | Os04g0598900 | - | Detail |
| C2H4g23112 | 4:25,990,395-25,992,751 | - | C1H4g27024 | CX4g034393 | LOC_Os04g51050 | Os04g0599000 | - | Detail |
| C2H4g27441 | 4:25,994,811-26,000,739 | - | C1H4g02875 | CX4g033004 | LOC_Os04g51060 | Os02g0700000 | - | Detail |
| C2H4g22306 | 4:26,004,241-26,006,549 | - | C1H4g14973 | CX4g034139 | LOC_Os04g51070 | Os04g0599300 | EAT1, OsbHLH141, EAT1/DTD1, bHLH141, DTD1, DTD | Detail |
| C2H4g03863 | 4:26,011,461-26,017,698 | + | C1H4g26976 | CX4g034652 | LOC_Os04g51080 | Os04g0599400 | - | Detail |
| C2H4g03311 | 4:26,020,975-26,035,049 | + | C1H4g19631 | CX4g033723 | LOC_Os04g51090 | Os04g0599650 | - | Detail |
| C2H4g27597 | 4:26,035,983-26,038,810 | + | C1H4g29659 | CX4g034671 | LOC_Os04g51100 | Os04g0599700 | - | Detail |
| C2H4g20047 | 4:26,039,513-26,042,411 | + | C1H4g20555 | CX4g033831 | LOC_Os04g51110 | Os04g0599800 | CDC20.1 | Detail |
| C2H4g05473 | 4:26,042,841-26,047,868 | + | C1H4g01630 | CX4g035744 | LOC_Os04g51120 | Os04g0599900 | - | Detail |
| C2H4g10442 | 4:26,050,574-26,052,329 | + | C1H4g04836 | CX4g035030 | LOC_Os04g51130 | Os04g0600000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |