| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g19663 | 6:1,774,370-1,775,440 | + | C2H6g00113 | CX6g041208 | LOC_Os06g05190 | Os06g0144000 | OsXRCC1 | Detail |
| C1H6g07683 | 6:1,780,602-1,782,042 | - | C2H6g04638 | CX6g043790 | LOC_Os06g05260 | Os06g0144900 | OsPLL7 | Detail |
| C1H6g25149 | 6:1,783,155-1,788,421 | + | C2H6g17269 | CX6g043358 | LOC_Os06g05250 | Os06g0144800 | - | Detail |
| C1H6g10899 | 6:1,789,715-1,797,030 | + | C2H6g23771 | CX6g045316 | LOC_Os06g05240 | Os06g0144600 | - | Detail |
| C1H6g31237 | 6:1,808,092-1,811,999 | - | C2H6g13388 | CX6g042959 | LOC_Os06g05220 | Os06g0278000 | - | Detail |
| C1H6g11997 | 6:1,814,462-1,815,861 | + | C2H6g27643 | CX6g044318 | LOC_Os06g05272 | Os06g0145000 | OsPLL8 | Detail |
| C1H6g16835 | 6:1,824,655-1,826,225 | + | C2H6g08117 | CX6g044252 | LOC_Os06g05284 | Os06g0145200 | - | Detail |
| C1H6g00499 | 6:1,828,294-1,830,190 | + | C2H6g06407 | CX6g044380 | LOC_Os06g05300 | Os06g0145300 | - | Detail |
| C1H6g27412 | 6:1,831,356-1,834,038 | + | C2H6g10577 | CX6g044398 | LOC_Os06g05310 | Os06g0145600 | - | Detail |
| C1H6g15042 | 6:1,836,364-1,840,428 | + | C2H6g00938 | CX6g044398 | LOC_Os06g05320 | Os06g0145600 | - | Detail |
| C1H6g28860 | 6:1,842,232-1,844,939 | - | C2H6g26989 | CX6g044776 | LOC_Os06g05340 | Os06g0145700 | OsWRI4, OsWRI5a | Detail |
| C1H6g04809 | 6:1,848,365-1,850,980 | + | C2H6g09415 | CX6g041367 | LOC_Os06g05350 | Os06g0145800 | OsWHY1 | Detail |
| C1H6g06658 | 6:1,853,732-1,858,346 | + | C2H6g30158 | CX6g045545 | LOC_Os06g05359 | Os06g0146100 | - | Detail |
| C1H6g06921 | 6:1,861,173-1,865,499 | + | C2H6g30158 | CX6g045545 | LOC_Os06g05359 | Os06g0146100 | - | Detail |
| C1H6g10315 | 6:1,874,261-1,880,113 | + | C2H6g10065 | CX6g042551 | LOC_Os06g05380 | Os06g0146250 | - | Detail |
| C1H6g01868 | 6:1,880,389-1,884,118 | - | C2H6g11563 | CX6g044514 | LOC_Os06g05390 | Os06g0146300 | - | Detail |
| C1H6g20638 | 6:1,884,710-1,886,545 | - | C2H6g22438 | CX6g043905 | LOC_Os06g05400 | Os06g0146400 | - | Detail |
| C1H6g00120 | 6:1,905,500-1,905,856 | - | C2H6g07839 | - | LOC_Os06g05430 | Os06g0147000 | - | Detail |
| C1H6g20647 | 6:1,909,174-1,909,533 | - | C2H6g00032 | - | LOC_Os06g05440 | Os06g0147100 | - | Detail |
| C1H6g01236 | 6:1,921,822-1,924,074 | - | C2H6g00111 | - | LOC_Os06g05480 | Os06g0147400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22839 | 4:19,950,887-19,951,792 | + | - | - | LOC_Os04g38920 | Os04g0463200 | - | Detail |
| C2H4g08523 | 4:19,953,814-19,955,643 | + | C1H4g05728 | CX4g036267 | LOC_Os04g38930 | Os04g0463300 | - | Detail |
| C2H4g23255 | 4:19,956,557-19,957,421 | - | C1H4g28377 | CX4g034571 | LOC_Os09g23300 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C2H4g07912 | 4:19,958,148-19,958,925 | - | C1H4g31445 | CX4g034571 | LOC_Os04g38940 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C2H4g28763 | 4:19,961,059-19,964,465 | - | C1H4g09561 | CX4g036538 | LOC_Os04g38950 | Os04g0463500 | TDD1, OASB1 | Detail |
| C2H4g00604 | 4:19,967,876-19,968,541 | - | - | - | - | - | - | Detail |
| C2H4g28177 | 4:19,968,988-19,971,300 | + | C1H4g11967 | CX4g033159 | LOC_Os04g38960 | Os04g0463600 | - | Detail |
| C2H4g13162 | 4:19,972,065-19,975,302 | - | C1H4g05080 | CX4g033067 | LOC_Os04g38970 | Os04g0463700 | - | Detail |
| C2H4g07932 | 4:19,980,354-19,982,657 | - | C1H4g02516 | CX4g036672 | LOC_Os04g38980 | Os04g0463800 | - | Detail |
| C2H4g12038 | 4:19,988,639-19,988,998 | + | C1H4g30641 | CX4g031871 | LOC_Os04g39010 | Os04g0464100 | - | Detail |
| C2H4g13985 | 4:19,998,440-20,003,172 | - | C1H4g01794 | CX4g032487 | LOC_Os04g39020 | Os04g0464200 | BAD1, Badh1, badh1, BAD1, BADH1, OsBADH1, BADH | Detail |
| C2H4g00984 | 4:20,005,937-20,009,902 | - | C1H4g07451 | CX4g035491 | LOC_Os04g39030 | Os04g0464400 | - | Detail |
| C2H4g04170 | 4:20,012,720-20,017,590 | + | C1H4g23214 | CX4g031502 | LOC_Os04g39040 | Os04g0464500 | - | Detail |
| C2H4g17001 | 4:20,018,221-20,019,219 | + | - | CX4g036018 | LOC_Os04g39050 | Os04g0464600 | - | Detail |
| C2H4g17707 | 4:20,020,772-20,021,056 | - | C1H4g17346 | - | - | - | - | Detail |
| C2H4g26653 | 4:20,027,874-20,028,167 | - | C1H4g20578 | CX4g036034 | - | - | - | Detail |
| C2H4g00542 | 4:20,040,523-20,046,626 | - | C1H4g22118 | CX4g035608 | LOC_Os04g39060 | Os04g0464800 | OsCFM2 | Detail |
| C2H4g07256 | 4:20,051,032-20,051,685 | - | C1H4g16307 | - | - | Os07g0567801 | - | Detail |
| C2H4g28234 | 4:20,056,175-20,058,216 | - | C1H4g29554 | CX4g032500 | LOC_Os04g39080 | Os04g0464966 | OsFbox217, Os_F0121, MOF | Detail |
| C2H4g22620 | 4:20,058,960-20,065,196 | + | C1H4g24682 | CX4g036673 | LOC_Os04g39090 | Os04g0465000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |